RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 GLYATQ6IB77 296 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 PAQR3Q6TCH7 311 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CLEC18BQ6UXF7 455 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SERPINA13PQ6UXR4 307 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SYVN1Q86TM6 617 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 FNDC5Q8NAU1 212 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CLEC18CQ8NCF0 446 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 PIK3C3Q8NEB9 887 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 PROKR1Q8TCW9 393 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CHPT1Q8WUD6 406 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CYB5D2Q8WUJ1 264 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 RPL10LQ96L21 214 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 NSMCE3Q96MG7 304 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SLC30A3Q99726 388 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SLC39A3Q9BRY0 314 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CIPCQ9C0C6 399 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 WDR12Q9GZL7 423 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 CCNB1IP1Q9NPC3 277 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 CD274Q9NZQ7 290 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 EGFL7Q9UHF1 273 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 TRPS1Q9UHF7 1281 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 MAPRE3Q9UPY8 281 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
SRP54-205ENST00000554803 NAALAD2Q9Y3Q0 740 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 PCDHGA11Q9Y5H2 935 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 SNX5Q9Y5X3 404 aa10.75□□□□□ -0.69
SRP54-205ENST00000554803 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 A0A1W2PR77 199 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 NPIPB8E9PQR5 432 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 KPNA4O00629 521 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 E2F3O00716 465 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 SIX3O95343 332 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 EIF2S1P05198 315 aaKnown RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 HNRNPCP07910 306 aaKnown RBP eCLIP10.74□□□□□ -0.698e-8■■■■□ 23.5
SRP54-205ENST00000554803 INHBBP09529 407 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 ALOX5P09917 674 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 ITGAMP11215 1152 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 PORP16435 677 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 ITGB6P18564 788 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 MAPK1P28482 360 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 CD38P28907 300 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 PSMD7P51665 324 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 CSNK2BP67870 215 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 GSTM4Q03013 218 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 MVKQ03426 396 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 OCA2Q04671 838 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 CACNG1Q06432 222 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 C16orf72Q14CZ0 275 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 ACOX1Q15067 660 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 CACHD1Q5VU97 1274 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 NIPAL1Q6NVV3 410 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 DLEU7Q6UYE1 221 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 KDELC2Q7Z4H8 507 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 OXR1Q8N573 874 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 DNAJB14Q8TBM8 379 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 MAGEE2Q8TD90 523 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 EXT2Q93063 718 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 TMIGD2Q96BF3 282 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 EXOC2Q96KP1 924 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 MRGPRX3Q96LB0 322 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 DEPDC7Q96QD5 511 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 GPR21Q99679 349 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 C2orf49Q9BVC5 232 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 UNKQ9C0B0 810 aaKnown RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 EPS8L2Q9H6S3 715 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 IL1RL2Q9HB29 575 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 RDH14Q9HBH5 336 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 HMG20AQ9NP66 347 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
SRP54-205ENST00000554803 LHX3Q9UBR4 397 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 SCML1Q9UN30 329 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 DHRS7Q9Y394 339 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 ARL5AQ9Y689 179 aa10.74□□□□□ -0.69
SRP54-205ENST00000554803 POLQO75417 2590 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 MYOCOSA0A1B0GUC4 107 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 ASPDHA6ND91 283 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 FAM220BPB1ANY3 271 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 E5RI56 91 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 G3V2T6 193 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 M0QX08 132 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 PLOD2O00469 737 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 PRMT5O14744 637 aaPredicted RBP10.73□□□□□ -0.69
SRP54-205ENST00000554803 GSTA4O15217 222 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 SLC22A1O15245 554 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 STX7O15400 261 aaKnown RBP10.73□□□□□ -0.69
SRP54-205ENST00000554803 SLC16A6O15403 523 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 DPM1O60762 260 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 CLPXO76031 633 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 TSPAN12O95859 305 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 DNTTP04053 509 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 GNAO1P09471 354 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 CBSLP0DN79 551 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 SRCP12931 536 aa10.73□□□□□ -0.69
SRP54-205ENST00000554803 ZNF7P17097 686 aaPredicted RBP10.73□□□□□ -0.69
SRP54-205ENST00000554803 POLR2EP19388 210 aaKnown RBP10.73□□□□□ -0.69
SRP54-205ENST00000554803 CRHBPP24387 322 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms