RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PHLDB2Q86SQ0 1253 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ASPGQ86U10 573 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SERPINA12Q8IW75 414 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CNTN4Q8IWV2 1026 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 KIRREL3Q8IZU9 778 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 WDSUB1Q8N9V3 476 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CLEC1AQ8NC01 280 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 LPCAT1Q8NF37 534 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 OR7A2PQ8NGA2 310 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 OR4C15Q8NGM1 316 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 HPSE2Q8WWQ2 592 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 METTL21AQ8WXB1 218 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PIK3R3Q92569 461 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SNRNP40Q96DI7 357 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 NXPE2Q96DL1 559 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 LGALS12Q96DT0 336 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CDKN2AIPNLQ96HQ2 116 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 C4orf45Q96LM5 186 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SPATA13Q96N96 652 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 NECTIN4Q96NY8 510 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PRAM1Q96QH2 718 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 LITAFQ99732 161 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ALKBH7Q9BT30 221 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 RBM4Q9BWF3 364 aaKnown RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 IDI2Q9BXS1 227 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PANK2Q9BZ23 570 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 CPVLQ9H3G5 476 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 THAP9Q9H5L6 903 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SCRT2Q9NQ03 307 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 PDRG1Q9NUG6 133 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 SPG21Q9NZD8 308 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 OR6C2Q9NZP2 312 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 LEF1Q9UJU2 399 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-213ENST00000554776 FBXW2Q9UKT8 454 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 KCNJ14Q9UNX9 436 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 ITM2BQ9Y287 266 aa2.77□□□□□ -1.97
SCFD1-213ENST00000554776 A0A0B4J203 849 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 IGHV4-61A0A0C4DH41 118 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TRBV4-1A0A0J9YWV2 114 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 C13orf42A0A1B0GVH6 325 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ANTXRLA6NF34 631 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 GLTPD2A6NH11 291 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ANKDD1BA6NHY2 528 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 RTCAO00442 366 aaKnown RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 EPHB6O15197 1021 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 NADKO95544 446 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 IGHV4-59P01825 116 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 FAM157CP0CG43 387 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 THEGLP0DJG4 465 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 HLA-DPA1P20036 260 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 CETN2P41208 172 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 CASP3P42574 277 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 KHKP50053 298 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ATP12AP54707 1039 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 UCP2P55851 309 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 BTG1P62324 171 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 GNB1P62873 340 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 FKBP1BP68106 108 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 GFPT1Q06210 699 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TEFQ10587 303 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 CBX3Q13185 183 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 C2orf76Q3KRA6 126 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM30BQ3MIR4 351 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF876PQ49A33 203 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 LCN1P1Q5VSP4 162 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 LRRC38Q5VT99 294 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 CPEB2Q7Z5Q1 589 aaKnown RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ZC3H3Q8IXZ2 948 aaKnown RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 PEX5LQ8IYB4 626 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 KLHDC8AQ8IYD2 350 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 GBP7Q8N8V2 638 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 SLC37A3Q8NCC5 494 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 OR2T11Q8NH01 316 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 SLC26A7Q8TE54 656 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM190Q8WZ59 177 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ATP6V0A1Q93050 837 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 RFT1Q96AA3 541 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 EPSTI1Q96J88 318 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 BTBD9Q96Q07 612 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM237Q96Q45 408 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 THAP2Q9H0W7 228 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 C5orf66Q9H5L9 145 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 EGLN3Q9H6Z9 239 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ATP13A3Q9H7F0 1226 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 AKIRIN1Q9H9L7 192 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 RNPEPL1Q9HAU8 725 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 MRPL17Q9NRX2 175 aaKnown RBP2.76□□□□□ -1.97
SCFD1-213ENST00000554776 DNAJC11Q9NVH1 559 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 C2orf42Q9NWW7 574 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 POMT2Q9UKY4 750 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 TMED7Q9Y3B3 224 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 KNSTRNQ9Y448 316 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 COLEC10Q9Y6Z7 277 aa2.76□□□□□ -1.97
SCFD1-213ENST00000554776 ARID2Q68CP9 1835 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 MAGEB16A2A368 324 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 MTMR11A4FU01 709 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF195O14628 629 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 PGRMC2O15173 223 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 MLNRO43193 412 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms