RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ASPDHA6ND91 283 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 HSPA4LO95757 839 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 RPLP0P05388 317 aaKnown RBP6.45□□□□□ -1.38
LINC00517-202ENST00000554257 CMPK1P30085 196 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 EMP3P54852 163 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 LSM12Q3MHD2 195 aaKnown RBP6.45□□□□□ -1.38
LINC00517-202ENST00000554257 FAM92BQ6ZTR7 304 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 ZFAND4Q86XD8 727 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 METTL4Q8N3J2 472 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 PMEPA1Q969W9 287 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 THAP11Q96EK4 314 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 APIPQ96GX9 242 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 SLC38A3Q99624 504 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 ACAT2Q9BWD1 397 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM120AQ9BXJ8 343 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 TRIM4Q9C037 500 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 WDR55Q9H6Y2 383 aaPredicted RBP6.45□□□□□ -1.38
LINC00517-202ENST00000554257 NPHS2Q9NP85 383 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 MARCOQ9UEW3 520 aaPredicted RBP6.45□□□□□ -1.38
LINC00517-202ENST00000554257 ZFP69BQ9UJL9 534 aa6.45□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM184BQ9Y519 407 aaPredicted RBP6.45□□□□□ -1.38
LINC00517-202ENST00000554257 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SLC9B1P1A6NJY1 282 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 RHPN2P1A8MT19 583 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SLCO1B7G3V0H7 640 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FOXS1O43638 330 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DUX1O43812 170 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FOXD2O60548 495 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FOLR1P15328 257 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 GPX3P22352 226 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TPP2P29144 1249 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 IL12AP29459 219 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 RPS15AP62244 130 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 HKDC1Q2TB90 917 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 RFTN2Q52LD8 501 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 MED27Q6P2C8 311 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TMIGD1Q6UXZ0 262 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ZNF517Q6ZMY9 492 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ALYREFQ86V81 257 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 PLD3Q8IV08 490 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TCTN2Q96GX1 697 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 METTL2AQ96IZ6 378 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FAR2Q96K12 515 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TEX37Q96LM6 180 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CCT7Q99832 543 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DPYSL5Q9BPU6 564 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 NUF2Q9BZD4 464 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 KCMF1Q9P0J7 381 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DYRK1BQ9Y463 629 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FFAR3O14843 346 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 GPR42O15529 346 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 KDM1AO60341 852 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SEMA3DO95025 777 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TIAF1O95411 115 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 LINC00032P0C843 101 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CSRP1P21291 193 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SERPINB1P30740 379 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 AQP5P55064 265 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 RPS13P62277 151 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TERF2Q15554 542 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SF1Q15637 639 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 GALNTL6Q49A17 601 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 C6orf136Q5SQH8 315 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 GPR155Q7Z3F1 870 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SPATA21Q7Z572 469 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CRLF3Q8IUI8 442 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 FUNDC1Q8IVP5 155 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DTWD1Q8N5C7 304 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 Q8N9G6 341 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 WDR48Q8TAF3 677 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 UTP15Q8TED0 518 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SLC45A3Q96JT2 553 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DDX31Q9H8H2 851 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 AIG1Q9NVV5 245 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SNX7Q9UNH6 387 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ERVK-11Q9UQG0 969 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 DLGAP4Q9Y2H0 992 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 PCDHGA11Q9Y5H2 935 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 H0YGG7 62 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TERTO14746 1132 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CPNE6O95741 557 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SERPINA6P08185 405 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 KITP10721 976 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ATP4BP51164 291 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 ARF3P61204 181 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 IRF8Q02556 426 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 PWP1Q13610 501 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 PDE7AQ13946 482 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 KCNAB1Q14722 419 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 SUZ12Q15022 739 aaKnown RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CPSF6Q16630 551 aaKnown RBP eCLIP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CFAP157Q5JU67 520 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 C8orf82Q6P1X6 216 aaPredicted RBP6.44□□□□□ -1.38
LINC00517-202ENST00000554257 PRSS41Q7RTY9 318 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 OR10G6Q8NH81 332 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 OR1L3Q8NH93 324 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 CMTM7Q96FZ5 175 aa6.44□□□□□ -1.38
LINC00517-202ENST00000554257 TGM7Q96PF1 710 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms