RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 DNAAF5Q86Y56 855 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 NOA1Q8NC60 698 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 PTERQ96BW5 349 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 FAM71F1Q96KD3 344 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CCDC68Q9H2F9 335 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 PARLQ9H300 379 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 ANKZF1Q9H8Y5 726 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 MYNNQ9NPC7 610 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 NSMCE4AQ9NXX6 385 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CRNNQ9UBG3 495 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 SLC24A2Q9UI40 661 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 CPSF3Q9UKF6 684 aaKnown RBP3.17□□□□□ -1.9
SCFD1-210ENST00000553693 SLIT1O75093 1534 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 FGD6Q6ZV73 1430 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 IGSF1Q8N6C5 1336 aa3.17□□□□□ -1.9
SCFD1-210ENST00000553693 LRRC9Q6ZRR7 1453 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 TMEM2Q9UHN6 1383 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ABCC3O15438 1527 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 PRDM15P57071 1507 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 TRBV5-5A0A0J9YX44 114 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 A8MV72 311 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 K7EQD1 137 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 POP4O95707 220 aaKnown RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ATP1B1P05026 303 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ELAVL4P26378 380 aaKnown RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 LMAN1P49257 510 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF177Q13360 481 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 FAM182AQ5T1J6 154 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 FAM205BPQ63HN1 556 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 FAM198BQ6UWH4 519 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ADGRA1Q86SQ6 560 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 RYBPQ8N488 228 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 TTC30BQ8N4P2 665 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 KLHDC1Q8N7A1 406 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 CHURC1Q8WUH1 139 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ERP27Q96DN0 273 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 CNRIP1Q96F85 164 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF414Q96IQ9 312 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ATF6BQ99941 703 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 GTSE1Q9NYZ3 720 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 CPSF2Q9P2I0 782 aaKnown RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 ELF5Q9UKW6 265 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-210ENST00000553693 WDR83OSQ9Y284 106 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 TET3O43151 1660 aa3.16□□□□□ -1.9
SCFD1-210ENST00000553693 SRRM5B3KS81 715 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 C2CD4DB7Z1M9 353 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 SURF4O15260 269 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 GJB3O75712 270 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 FOLR2P14207 255 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 KRT20P35900 424 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 HNRNPKP61978 463 aaKnown RBP eCLIP3.15□□□□□ -1.91
SCFD1-210ENST00000553693 PSMC6P62333 389 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 POU5F1Q01860 360 aaKnown RBP3.15□□□□□ -1.91
SCFD1-210ENST00000553693 IDI1Q13907 227 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 VEZF1Q14119 521 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 GPR33Q49SQ1 333 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 FAM133BQ5BKY9 247 aaKnown RBP3.15□□□□□ -1.91
SCFD1-210ENST00000553693 BRINP3Q76B58 766 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 PHC2Q8IXK0 858 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 OR4D10Q8NGI6 311 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 OR10G7Q8NGN6 311 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 C2orf48Q96LS8 159 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 CCDC3Q9BQI4 270 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 CHCHD5Q9BSY4 110 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 CDH20Q9HBT6 801 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 PRMT7Q9NVM4 692 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-210ENST00000553693 CLIC5Q9NZA1 410 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 NRBP1Q9UHY1 535 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 TSPAN16Q9UKR8 245 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 GPR34Q9UPC5 381 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 RPS6KL1Q9Y6S9 549 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 TIAM1Q13009 1591 aa3.15□□□□□ -1.91
SCFD1-210ENST00000553693 MYH14Q7Z406 1995 aaKnown RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 SHPRHQ149N8 1683 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 MTUS2Q5JR59 1369 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 HCFC1P51610 2035 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 CROCCQ5TZA2 2017 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 DIP2AQ14689 1571 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 SLC1A7O00341 560 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 STARD3NLO95772 234 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 HPP00738 406 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY4P0CV99 314 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY10P0CW01 314 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PORP16435 677 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-210ENST00000553693 AADACP22760 399 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 LHX1P48742 406 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 LIG4P49917 911 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 ASCL1P50553 236 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 DHODHQ02127 395 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 STK4Q13043 487 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 PSMD6Q15008 389 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 NPTX1Q15818 432 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 FAM189A2Q15884 450 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 MEA1Q16626 185 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 GARNL3Q5VVW2 1013 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 DEFB132Q7Z7B7 95 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 C11orf53Q8IXP5 236 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 OR8H2Q8N162 312 aa3.14□□□□□ -1.91
SCFD1-210ENST00000553693 SYT2Q8N9I0 419 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms