RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PRAMEF4O60810 478 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ADAM23O75077 832 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CCNDBP1O95273 360 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 KLF8O95600 359 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PAK4O96013 591 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 IGLV3-19P01714 112 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CEACAM5P06731 702 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 RETP07949 1114 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ANXA6P08133 673 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ABCB1P08183 1280 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 RPSAP08865 295 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PIM1P11309 404 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CDH1P12830 882 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 GGT1P19440 569 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CD22P20273 847 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 HTR1BP28222 390 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PEX2P28328 305 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 TIA1P31483 386 aaKnown RBP eCLIP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 GRIA3P42263 894 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 WASP42768 502 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SOX9P48436 509 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 RAB28P51157 221 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CCR8P51685 355 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 NEK2P51955 445 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 POLE2P56282 527 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 DLX2Q07687 328 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CYP4F3Q08477 520 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ABHD18Q0P651 414 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SMAD4Q13485 552 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 BLMHQ13867 455 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 DUOXA1Q1HG43 343 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 AAK1Q2M2I8 961 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 GRAMD1BQ3KR37 738 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 LRIT3Q3SXY7 679 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CCSMST1Q4G0I0 132 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 RABL3Q5HYI8 236 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SPANXN4Q5MJ08 99 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 THEMIS2Q5TEJ8 643 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PRAMEF9Q5VWM5 478 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SUSD1Q6UWL2 747 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 TMIGD1Q6UXZ0 262 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 RNF111Q6ZNA4 994 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PAGE2Q7Z2X7 111 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 TMPRSS11BQ86T26 416 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SERPINA11Q86U17 422 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 C17orf64Q86WR6 236 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 EID3Q8N140 333 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SYNPOQ8N3V7 929 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 LILRA3Q8N6C8 439 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 FAM156AQ8NDB6 213 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 OR2T12Q8NG77 320 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 OR4K1Q8NGD4 311 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 HUS1BQ8NHY5 278 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ZFPM2Q8WW38 1151 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 EZH1Q92800 747 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 EME1Q96AY2 570 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 COQ8BQ96D53 544 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 MTFMTQ96DP5 389 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 APIPQ96GX9 242 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CENPNQ96H22 339 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 REXO5Q96IC2 774 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PKP2Q99959 881 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CENPKQ9BS16 269 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 APOOQ9BUR5 198 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 OSBPL10Q9BXB5 764 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 MKRN2Q9H000 416 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 BTBD1Q9H0C5 482 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 MAGIXQ9H6Y5 334 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 COPS7BQ9H9Q2 264 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 DMRT3Q9NQL9 472 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 MBNL1Q9NR56 388 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 OLAHQ9NV23 265 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 GEMIN8Q9NWZ8 242 aaKnown RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 FAM8A1Q9UBU6 413 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ATP6V1HQ9UI12 483 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ANAPC2Q9UJX6 822 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ADAM29Q9UKF5 820 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PACSIN3Q9UKS6 424 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 MMP17Q9ULZ9 603 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 INVSQ9Y283 1065 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 DLGAP4Q9Y2H0 992 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM98Q9Y2Y6 226 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 PCDHGA2Q9Y5H1 932 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 COLEC10Q9Y6Z7 277 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 ALPK3Q96L96 1907 aa7.03□□□□□ -1.28
ATXN3-221ENST00000553498 CHD9Q3L8U1 2897 aa7.02□□□□□ -1.28
ATXN3-221ENST00000553498 NOTCH4Q99466 2003 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D3DA0A087WVF3 549 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D3IA0A087WXS9 549 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D3EA0A087X179 549 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D3KA0A087X1G2 549 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 ELOVL7A1L3X0 281 aa7.02□□□□□ -1.29
ATXN3-221ENST00000553498 TBC1D3FA6NER0 549 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms