RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MEP1AQ16819 746 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-205ENST00000553474 SLCO4C1Q6ZQN7 724 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 ZC3H7AQ8IWR0 971 aaKnown RBP12.45□□□□□ -0.42
SHMT2-205ENST00000553474 HS3ST5Q8IZT8 346 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 FNDC8Q8TC99 324 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 SNX19Q92543 992 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 UBE2E3Q969T4 207 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 MTERF3Q96E29 417 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 TCEAL4Q96EI5 215 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 MED8Q96G25 268 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 LINC00615Q96LM1 132 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-205ENST00000553474 COQ10AQ96MF6 247 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 EPYCQ99645 322 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 DCUN1D5Q9BTE7 237 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 EBPLQ9BY08 206 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 CHST8Q9H2A9 424 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 LINC00597Q9H2U6 94 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 REEP1Q9H902 201 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 TBC1D23Q9NUY8 699 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 SCN3BQ9NY72 215 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 DPP7Q9UHL4 492 aa12.45□□□□□ -0.42
SHMT2-205ENST00000553474 A0A1W2PPW3 197 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 GABRR3A8MPY1 467 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-205ENST00000553474 B4GAT1O43505 415 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 C1orf105O95561 183 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 BCL10O95999 233 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 LAMP1P11279 417 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 IL7RP16871 459 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 MATN1P21941 496 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 PCGF2P35227 344 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 DGKGP49619 791 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 CTSCP53634 463 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 PHEXP78562 749 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF763Q0D2J5 394 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 CDK5R2Q13319 367 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 HIST2H2ACQ16777 129 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-205ENST00000553474 CTU2Q2VPK5 515 aaKnown RBP12.44□□□□□ -0.42
SHMT2-205ENST00000553474 TCEAL5Q5H9L2 206 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 FGD3Q5JSP0 725 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 PRSS36Q5K4E3 855 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 HIST2H2AA3Q6FI13 130 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 CHST15Q7LFX5 561 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-205ENST00000553474 ANKRD13BQ86YJ7 626 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 C1orf52Q8N6N3 182 aaKnown RBP12.44□□□□□ -0.42
SHMT2-205ENST00000553474 C11orf65Q8NCR3 313 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 TMIEQ8NEW7 156 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 HUS1BQ8NHY5 278 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 PKP4Q99569 1192 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 LHPPQ9H008 270 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 RAD21L1Q9H4I0 556 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 TBCCD1Q9NVR7 557 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 DYRK1BQ9Y463 629 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 DENND4AQ7Z401 1863 aa12.44□□□□□ -0.42
SHMT2-205ENST00000553474 A0A0J9YVX5 310 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 TMEM202A6NGA9 273 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 A8MVJ9 347 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ADH1CP00326 375 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 IDSP22304 550 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ITGB7P26010 798 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PLA2G16P53816 162 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 RAE1P78406 368 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DPTQ07507 201 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 FADDQ13158 208 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 RGNQ15493 299 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 TMEM220Q6QAJ8 160 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 CYP4Z1Q86W10 505 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 CELF5Q8N6W0 485 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF513Q8N8E2 541 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 TBC1D15Q8TC07 691 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ZFP90Q8TF47 636 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SETD7Q8WTS6 366 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PPP1R16AQ96I34 528 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 HSH2DQ96JZ2 352 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SGPP1Q9BX95 441 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DUSP21Q9H596 190 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 FZD4Q9ULV1 537 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ABCG2Q9UNQ0 655 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 GPR34Q9UPC5 381 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PCDHGB3Q9Y5G1 929 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 HCFC2Q9Y5Z7 792 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 U3KQV3 271 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 BRWD1Q9NSI6 2320 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 GNG14A0A1W2PPG7 69 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ADAMDEC1O15204 470 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SUV39H1O43463 412 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 CPSF4O95639 269 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 C9P02748 559 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 HTR1AP08908 422 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms