RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RAB43Q86YS6 212 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 PLD6Q8N2A8 252 aaKnown RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 ZNF740Q8NDX6 193 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 NT5CQ8TCD5 201 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 SLC13A3Q8WWT9 602 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 IP6K3Q96PC2 410 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 SPSB2Q99619 263 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 SPNS1Q9H2V7 528 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 NT5DC2Q9H857 520 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 TUBD1Q9UJT1 453 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 RALYQ9UKM9 306 aaKnown RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 TMCO1Q9UM00 188 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 PTRH2Q9Y3E5 179 aaKnown RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 KCNMB2Q9Y691 235 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 SLC22A7Q9Y694 548 aa17.55■□□□□ 0.4
CPSF2-202ENST00000553427 TLN1Q9Y490 2541 aaKnown RBP17.55■□□□□ 0.4
CPSF2-202ENST00000553427 IQANK1A0A1B0GTG1 560 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 K7EPI3 171 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 NSA2O95478 260 aaKnown RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 SFTPCP11686 197 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 FBLP22087 321 aaKnown RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 ALDH18A1P54886 795 aaKnown RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 MEF2AQ02078 507 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 NAA30Q147X3 362 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 TBCCQ15814 346 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 TDRPQ86YL5 185 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 AFAP1L2Q8N4X5 818 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 DTWD1Q8N5C7 304 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 METTL27Q8N6F8 245 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 TRPV3Q8NET8 790 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 TTLQ8NG68 377 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 ACMSDQ8TDX5 336 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 GEMIN8Q9NWZ8 242 aaKnown RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 CTSFQ9UBX1 484 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 ZNF282Q9UDV7 671 aaPredicted RBP17.54■□□□□ 0.4
CPSF2-202ENST00000553427 MAN2B2Q9Y2E5 1009 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 ASB1Q9Y576 335 aa17.54■□□□□ 0.4
CPSF2-202ENST00000553427 CFAP46Q8IYW2 2715 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 CLGNO14967 610 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 NDUFS4O43181 175 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 H2AFYO75367 372 aaKnown RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 UMODP07911 640 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 EPORP19235 508 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 VARSP26640 1264 aaKnown RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 CASP2P42575 452 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 AVPR1BP47901 424 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 POLE2P56282 527 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 RGS1Q08116 209 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 FAM69BQ5VUD6 431 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 EMBQ6PCB8 327 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 MRGPREQ86SM8 312 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 KRT78Q8N1N4 520 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 AMER3Q8N944 861 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 SNX31Q8N9S9 440 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 ANKRD53Q8N9V6 530 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 AENQ8WTP8 325 aaKnown RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 MZB1Q8WU39 189 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 UBLCP1Q8WVY7 318 aaPredicted RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 SLC39A7Q92504 469 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 COL26A1Q96A83 441 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 ARHGAP9Q9BRR9 750 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 EFCAB11Q9BUY7 163 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 TGIF2Q9GZN2 237 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 C14orf105Q9NVL8 296 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 OPTCQ9UBM4 332 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 MRPS2Q9Y399 296 aaKnown RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 MAP4K5Q9Y4K4 846 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 TNPO3Q9Y5L0 923 aaKnown RBP17.53■□□□□ 0.4
CPSF2-202ENST00000553427 MAU2Q9Y6X3 613 aa17.53■□□□□ 0.4
CPSF2-202ENST00000553427 A0A0A6YYC8 382 aaPredicted RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 I3L1I5 382 aaPredicted RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 CCNT2O60583 730 aaKnown RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 GFAPP14136 432 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 AGTR2P50052 363 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 OCA2Q04671 838 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 LAPTM5Q13571 262 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 COL9A2Q14055 689 aaPredicted RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 SLBPQ14493 270 aaKnown RBP eCLIP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 HERC3Q15034 1050 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 PCBP2Q15366 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 FBXO48Q5FWF7 155 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 NIPAL1Q6NVV3 410 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 TMIGD1Q6UXZ0 262 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 EXD3Q8N9H8 876 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 KCT2Q8NC54 265 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 STT3BQ8TCJ2 826 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 ESAMQ96AP7 390 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 PTCD3Q96EY7 689 aaKnown RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 MMABQ96EY8 250 aaPredicted RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 MRPL57Q9BQC6 102 aaKnown RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 SLC6A16Q9GZN6 736 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 MRPL46Q9H2W6 279 aaKnown RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 MKKSQ9NPJ1 570 aaPredicted RBP17.52■□□□□ 0.4
CPSF2-202ENST00000553427 XPR1Q9UBH6 696 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 SPTA1P02549 2419 aa17.52■□□□□ 0.4
CPSF2-202ENST00000553427 BSNQ9UPA5 3926 aa17.51■□□□□ 0.39
CPSF2-202ENST00000553427 PRAMEF4O60810 478 aa17.51■□□□□ 0.39
CPSF2-202ENST00000553427 IGHEP01854 428 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms