RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.41
SNRPF-203ENST00000551316 ATP6AP2O75787 350 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 AGTP01019 485 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 TUBB4AP04350 444 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 IL1RNP18510 177 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 MC4RP32245 332 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 SOX18P35713 384 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 MAN2A2P49641 1150 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 AGTR2P50052 363 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 TAS2R40P59535 323 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 WASHC5Q12768 1159 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 MSLNQ13421 630 aaPredicted RBP12.46□□□□□ -0.41
SNRPF-203ENST00000551316 WLSQ5T9L3 541 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 E4F1Q66K89 784 aaPredicted RBP12.46□□□□□ -0.41
SNRPF-203ENST00000551316 IL17RELQ6ZVW7 336 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 SNX20Q7Z614 316 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 PDSS2Q86YH6 399 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 PLD3Q8IV08 490 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 ARIH2OSQ8N7S6 290 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 SREK1Q8WXA9 508 aaKnown RBP12.46□□□□□ -0.41
SNRPF-203ENST00000551316 ULK4Q96C45 1275 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 PIK3IP1Q96FE7 263 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 TEKT5Q96M29 485 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 OR2A5Q96R48 311 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 MACROD1Q9BQ69 325 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 APOL2Q9BQE5 337 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 ACAT2Q9BWD1 397 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 L2HGDHQ9H9P8 463 aa12.46□□□□□ -0.41
SNRPF-203ENST00000551316 ZNF701Q9NV72 531 aaPredicted RBP12.46□□□□□ -0.41
SNRPF-203ENST00000551316 MED12LQ86YW9 2145 aa12.46□□□□□ -0.42
SNRPF-203ENST00000551316 SERINC4A6NH21 518 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 SGK494L7N484 410 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 ACOT7O00154 380 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 CES2O00748 559 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 FTLP02792 175 aaPredicted RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 PAX1P15863 534 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 ITGALP20701 1170 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 OR4D2P58180 307 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 NSDHLQ15738 373 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 TPD52L1Q16890 204 aaPredicted RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 CLEC12BQ2HXU8 276 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 FAM174BQ3ZCQ3 159 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 SYTL3Q4VX76 610 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 TEX44Q53QW1 395 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 WIPI1Q5MNZ9 446 aaPredicted RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 IRF2BP2Q7Z5L9 587 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 FAM109AQ8N4B1 249 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 NIPA2Q8N8Q9 360 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 ZBED6CLQ96FA7 236 aaPredicted RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 LRRC46Q96FV0 321 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 SLC6A15Q9H2J7 730 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 LIN28AQ9H9Z2 209 aaKnown RBP12.45□□□□□ -0.42
SNRPF-203ENST00000551316 DUSP10Q9Y6W6 482 aa12.45□□□□□ -0.42
SNRPF-203ENST00000551316 ZNF860A6NHJ4 632 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 FAM47E-STBD1D6RA91 191 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 RDH16O75452 317 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 ITGA10O75578 1167 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 CYC1P08574 325 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 FPR1P21462 350 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 DNASE1L1P49184 302 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 ATP5J2P56134 94 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 ACTN3Q08043 901 aaPredicted RBP12.44□□□□□ -0.42
SNRPF-203ENST00000551316 FOXO1Q12778 655 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 PTK6Q13882 451 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 TAF1AQ15573 450 aaPredicted RBP12.44□□□□□ -0.42
SNRPF-203ENST00000551316 TCP11X2Q5H9J9 407 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 PLXDC2Q6UX71 529 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 SLC22A15Q8IZD6 547 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 SLC22A8Q8TCC7 542 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 RAPGEF5Q92565 580 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 C1orf159Q96HA4 380 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 DNAJC1Q96KC8 554 aaKnown RBP12.44□□□□□ -0.42
SNRPF-203ENST00000551316 MARK4Q96L34 752 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
SNRPF-203ENST00000551316 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
SNRPF-203ENST00000551316 NFS1Q9Y697 457 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 SCINQ9Y6U3 715 aa12.44□□□□□ -0.42
SNRPF-203ENST00000551316 OR6B1O95007 311 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 EPOP01588 193 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 GABRA1P14867 456 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
SNRPF-203ENST00000551316 DEFA6Q01524 100 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 GARNL3Q5VVW2 1013 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 C20orf204Q6ZNR8 217 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 SLC22A16Q86VW1 577 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
SNRPF-203ENST00000551316 APCDD1LQ8NCL9 501 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 SARAFQ96BY9 339 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 TUBA8Q9NY65 449 aaPredicted RBP12.43□□□□□ -0.42
SNRPF-203ENST00000551316 SMARCAL1Q9NZC9 954 aa12.43□□□□□ -0.42
SNRPF-203ENST00000551316 R3HDM2Q9Y2K5 976 aaKnown RBP12.43□□□□□ -0.42
SNRPF-203ENST00000551316 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
SNRPF-203ENST00000551316 TRBV11-1A0A0K0K1C0 115 aa12.42□□□□□ -0.42
SNRPF-203ENST00000551316 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
SNRPF-203ENST00000551316 FCHO1O14526 889 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms