RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 NUMA1Q14980 2115 aa5.59□□□□□ -1.52
SCAF11-213ENST00000550629 LRRK1Q38SD2 2015 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KIR2DS5A0A0G2JLQ3 304 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 A0A0G2JNG1 304 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC5A10A0PJK1 596 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 LNP1A1A4G5 178 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 A6NCN8 305 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 OR5K4A6NMS3 321 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 POC1B-GALNT4F8VUJ3 575 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KIR2DS3K7RE56 304 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 DYNC1I1O14576 645 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 RASGRF2O14827 1237 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SCAMP1O15126 338 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 AQP9O43315 295 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 NIPSNAP2O75323 286 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GPC4O75487 556 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PIAS1O75925 651 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PIAS2O75928 621 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 TRIM16O95361 564 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SHBGP04278 402 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 RPN2P04844 631 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC35G4P0C7Q5 338 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ACP5P13686 325 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CTSEP14091 401 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 STMN1P16949 149 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ENGP17813 658 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KRT4P19013 534 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CHRM3P20309 590 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 IDSP22304 550 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 DGKAP23743 735 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GCAP28676 217 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 EPHA8P29322 1005 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CCR7P32248 378 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 MAGEA12P43365 314 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 RGS4P49798 205 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CSRP3P50461 194 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CCT8P50990 548 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ATXN3P54252 364 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CDKN2DP55273 166 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 TAS2R39P59534 338 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 RAB10P61026 200 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 IRX4P78413 519 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 TIAL1Q01085 375 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 NHLH1Q02575 133 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF844Q08AG5 666 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GBX1Q14549 363 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KIR2DS5Q14953 304 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 EFTUD2Q15029 972 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SMAD1Q15797 465 aaKnown RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 LPAL2Q16609 132 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 INSCQ1MX18 579 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 UAP1L1Q3KQV9 507 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SYTL3Q4VX76 610 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 HECTD2Q5U5R9 776 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KCTD16Q68DU8 428 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ABRAXAS1Q6UWZ7 409 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 LAYNQ6UX15 382 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 DET1Q7L5Y6 550 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CHST15Q7LFX5 561 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GKN2Q86XP6 184 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 NRROSQ86YC3 692 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC22A15Q8IZD6 547 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 NKAPQ8N5F7 415 aaKnown RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GPATCH11Q8N954 259 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF548Q8NEK5 533 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 OR10H5Q8NGA6 315 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CD200R1Q8TD46 325 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ACMSDQ8TDX5 336 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SAP25Q8TEE9 199 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ZFPM2Q8WW38 1151 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ELMO1Q92556 727 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 TMEM159Q96B96 161 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PGM2Q96G03 612 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 ELMO2Q96JJ3 720 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CABS1Q96KC9 395 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 LRRC61Q9BV99 259 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 GAREM1Q9H706 876 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 COG4Q9H9E3 785 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SYTL2Q9HCH5 934 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 MRPL40Q9NQ50 206 aaKnown RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 DMRT3Q9NQL9 472 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 KLC4Q9NSK0 619 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 CCM2LQ9NUG4 571 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 EURLQ9NYK6 297 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SENP1Q9P0U3 644 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC17A6Q9P2U8 582 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC23A2Q9UGH3 650 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 TRMT6Q9UJA5 497 aaKnown RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 MOSPD1Q9UJG1 213 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 SLC39A10Q9ULF5 831 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PNMA8BQ9ULN7 279 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 MTO1Q9Y2Z2 717 aaKnown RBP5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PRSS21Q9Y6M0 314 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 VPS13AQ96RL7 3174 aa5.58□□□□□ -1.52
SCAF11-213ENST00000550629 PCDH15Q96QU1 1955 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 GOLGA6L10A6NI86 522 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 TRIM49D1C9J1S8 452 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 IFRD1O00458 451 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-213ENST00000550629 SLC16A5O15375 505 aa5.57□□□□□ -1.52
SCAF11-213ENST00000550629 YY2O15391 372 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms