RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 EXT1Q16394 746 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 PHKG1Q16816 387 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 RBM20Q5T481 1227 aaKnown RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 MFSD4BQ5TF39 518 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 STEAP4Q687X5 459 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 PLAG1Q6DJT9 500 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 FAAH2Q6GMR7 532 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 MAMDC2Q7Z304 686 aaPredicted RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 CPEB2Q7Z5Q1 589 aaKnown RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 SLC26A11Q86WA9 606 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 CREG2Q8IUH2 290 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 IGDCC3Q8IVU1 814 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 KLHL7Q8IXQ5 586 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 PLPP5Q8NEB5 264 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 DNAJB8Q8NHS0 232 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ALKBH8Q96BT7 664 aaKnown RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 CFAP36Q96G28 342 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ZNF354BQ96LW1 612 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 NAPGQ99747 312 aaPredicted RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 VN1R1Q9GZP7 353 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 SYNPO2LQ9H987 977 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 OLAHQ9NV23 265 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ZFATQ9P243 1243 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ABI3Q9P2A4 366 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ERRFI1Q9UJM3 462 aaPredicted RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 KCNE2Q9Y6J6 123 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 PCSK5Q92824 1860 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 NOTCH2Q04721 2471 aa10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
VTI1BP3-201ENST00000550220 ICE1Q9Y2F5 2266 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SHANK1Q9Y566 2161 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 FFAR3O14843 346 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 GPR42O15529 346 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 OR1F1O43749 312 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 LDLRP01130 860 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 IL1RNP18510 177 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 JAK1P23458 1154 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 AHRP35869 848 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 ITGA8P53708 1063 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CDKL1Q00532 357 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 ACTN3Q08043 901 aaPredicted RBP10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 MGAT5Q09328 741 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CBLBQ13191 982 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SYT16Q17RD7 645 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 ABHD13Q7L211 337 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SIRT6Q8N6T7 355 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CATSPER1Q8NEC5 780 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 TRPV3Q8NET8 790 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 M1APQ8TC57 530 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SLC5A11Q8WWX8 675 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CAPZA3Q96KX2 299 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 MAGEB10Q96LZ2 347 aaPredicted RBP10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 SLX1AQ9BQ83 275 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CAPS2Q9BXY5 557 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 MOCS1Q9NZB8 636 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CHMP2BQ9UQN3 213 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 NTNG1Q9Y2I2 539 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 DYRK1BQ9Y463 629 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 CSAG2Q9Y5P2 127 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 PCM1Q15154 2024 aa10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 PRRC2CQ9Y520 2896 aaKnown RBP10.28□□□□□ -0.76
VTI1BP3-201ENST00000550220 FEZF1A0PJY2 475 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR5H15A6NDH6 313 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 EFCAB8A8MWE9 144 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 MAGEB17A8MXT2 336 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 SGK494L7N484 410 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 NDUFS4O43181 175 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 LCMT2O60294 686 aaKnown RBP10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 H2AFYO75367 372 aaKnown RBP10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 BANF1O75531 89 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 MLYCDO95822 493 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF37AP17032 561 aaPredicted RBP10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 ALOX12P18054 663 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 GSTM2P28161 218 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 HPDP32754 393 aaPredicted RBP10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC12A2P55011 1212 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 PDIA2Q13087 525 aaKnown RBP10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 NSDHLQ15738 373 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 BTBD16Q32M84 506 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 MBOAT1Q6ZNC8 495 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 ADAMTSL2Q86TH1 951 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 LGI4Q8N135 537 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 HORMAD2Q8N7B1 307 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 KCT2Q8NC54 265 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 TTLQ8NG68 377 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 NT5CQ8TCD5 201 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 CDKL2Q92772 493 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 TBC1D20Q96BZ9 403 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 SEC16BQ96JE7 1060 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 LPAR4Q99677 370 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 AIF1LQ9BQI0 150 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 KCNF1Q9H3M0 494 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 PELI2Q9HAT8 420 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 POPDC3Q9HBV1 291 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 MMP25Q9NPA2 562 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms