RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 PTK6Q13882 451 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 DHX34Q14147 1143 aaKnown RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 OR1C1Q15619 314 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 SPINK14Q6IE38 97 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 UBE2R2Q712K3 238 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 PDSS2Q86YH6 399 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 CPNE9Q8IYJ1 553 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 KCT2Q8NC54 265 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 CD200R1Q8TD46 325 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 MCOLN3Q8TDD5 553 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 THAP3Q8WTV1 239 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 KCNJ9Q92806 393 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 SCMH1Q96GD3 660 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 UTP23Q9BRU9 249 aaKnown RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 CCDC177Q9NQR7 707 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 KLHL42Q9P2K6 505 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 ZNF835Q9Y2P0 537 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 DHRS7Q9Y394 339 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 PCDHGB6Q9Y5F9 930 aa14.52□□□□□ -0.09
RAB5C-205ENST00000550013 SETD2Q9BYW2 2564 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-205ENST00000550013 KCNE1BA0A087WTH5 132 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 ZNF860A6NHJ4 632 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 NPIPA5E9PKD4 350 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 KIF5CO60282 957 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 LCMT2O60294 686 aaKnown RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 CDC123O75794 336 aaPredicted RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 ENO3P13929 434 aaPredicted RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 AGTR2P50052 363 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 SMSP52788 366 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 THOC5Q13769 683 aaKnown RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 EXT1Q16394 746 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MEP1AQ16819 746 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 SFT2D3Q587I9 215 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 PAPD4Q6PIY7 484 aaKnown RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MBOAT1Q6ZNC8 495 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 Q6ZPB1 254 aaPredicted RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 SPPL2CQ8IUH8 684 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 M1APQ8TC57 530 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 TSLPQ969D9 159 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MTFMTQ96DP5 389 aaKnown RBP14.51□□□□□ -0.09
RAB5C-205ENST00000550013 TM4SF19Q96DZ7 209 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 FRMD6Q96NE9 622 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 CCDC68Q9H2F9 335 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 ANKHQ9HCJ1 492 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MMP25Q9NPA2 562 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 SAMD15Q9P1V8 674 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 ITGB1BP2Q9UKP3 347 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 ADAMTS6Q9UKP5 1117 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 NPIPA1Q9UND3 350 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MEMO1Q9Y316 297 aa14.51□□□□□ -0.09
RAB5C-205ENST00000550013 MED13LQ71F56 2210 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 ZCWPW2A0A1B0GU75 182 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 FAM237BA0A1B0GVD1 139 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 ASPDHA6ND91 283 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 GABRR3A8MPY1 467 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 CD46P15529 392 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 AGAP20933 346 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 HRH2P25021 359 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 EEF1DP29692 281 aaKnown RBP14.5□□□□□ -0.09
RAB5C-205ENST00000550013 SLC1A2P43004 574 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 MAGEA6P43360 314 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 KIR3DL1P43629 444 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 RIPPLY3P57055 190 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 MPP1Q00013 466 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 RHAGQ02094 409 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 ACTN3Q08043 901 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-205ENST00000550013 GPS1Q13098 491 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 ABRAXAS2Q15018 415 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 KRTCAP3Q53RY4 240 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 GALNTL5Q7Z4T8 443 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 ASPGQ86U10 573 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 SLC26A11Q86WA9 606 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 SIAH3Q8IW03 269 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 CAMKVQ8NCB2 501 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 OR5T3Q8NGG3 340 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 MAIP1Q8WWC4 291 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 THAP11Q96EK4 314 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 PEX11GQ96HA9 241 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 LANCL2Q9NS86 450 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 NAALAD2Q9Y3Q0 740 aa14.5□□□□□ -0.09
RAB5C-205ENST00000550013 CEP104O60308 925 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 NEURL1O76050 574 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 CLDN14O95500 239 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 CDH1P12830 882 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 KRTAP10-9P60411 292 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 SARNPP82979 210 aaKnown RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 HSF1Q00613 529 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 OC90Q02509 493 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 USP10Q14694 798 aaKnown RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 NSDHLQ15738 373 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 ZNF468Q5VIY5 522 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 ARMC3Q5W041 872 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 PCGF5Q86SE9 256 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 C17orf64Q86WR6 236 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 AGGF1Q8N302 714 aaeCLIP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 SLC13A3Q8WWT9 602 aa14.49□□□□□ -0.09
RAB5C-205ENST00000550013 ALKBH8Q96BT7 664 aaKnown RBP14.49□□□□□ -0.09
RAB5C-205ENST00000550013 LPAR4Q99677 370 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms