RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 MFHAS1Q9Y4C4 1052 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 A0A0B4J293 547 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 ANHXE9PGG2 379 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 NEDD8-MDP1E9PL57 170 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 NEURL1O76050 574 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 LCA5LO95447 670 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PLAUP00749 431 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PDGFBP01127 241 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 IGLV3-25P01717 112 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 APOEP02649 317 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CD48P09326 243 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PSMC3P17980 439 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 RDXP35241 583 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 PPP3CCP48454 512 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 IFNAR2P48551 515 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 KRT83P78385 493 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CDSNQ15517 529 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 HIST2H2ACQ16777 129 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 EIF2S3LQ2VIR3 472 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 PPP6R3Q5H9R7 873 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 ABHD17BQ5VST6 288 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PMS2CLQ68D20 193 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CAMKMTQ7Z624 323 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 ZDHHC17Q8IUH5 632 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 WFDC5Q8TCV5 224 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 KCNE4Q8WWG9 221 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CHFRQ96EP1 664 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 VCPIP1Q96JH7 1222 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CEP295NLQ96MC4 621 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PRICKLE1Q96MT3 831 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 SERPINB11Q96P15 392 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CNPY3Q9BT09 278 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 SNRNP25Q9BV90 132 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 TRMT61BQ9BVS5 477 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 DHX35Q9H5Z1 703 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 MVB12BQ9H7P6 319 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CEPT1Q9Y6K0 416 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 DENND4CQ5VZ89 1909 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 ATG2BQ96BY7 2078 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 A4D1N5 150 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 GRID2IPA4D2P6 1211 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 SPOPO43791 374 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 MITFO75030 526 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 PALMO75781 387 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PROSCO94903 275 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CCDC175P0C221 793 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CTPS1P17812 591 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 ATP6V1E1P36543 226 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 COG7P83436 770 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 ITGADQ13349 1161 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 NAE1Q13564 534 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 MS4A13Q5J8X5 152 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 RWDD4Q6NW29 188 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 RHBDF2Q6PJF5 856 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 LEKR1Q6ZMV7 388 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CYP4V2Q6ZWL3 525 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 MTSS1LQ765P7 747 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 MFSD6LQ8IWD5 586 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CCAR2Q8N163 923 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 MINDY1Q8N5J2 469 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 CCDC112Q8NEF3 446 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 KRT35Q92764 455 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 NT5C3BQ969T7 300 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 AGAP2Q99490 1192 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 POLDIP3Q9BY77 421 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 NPFFR1Q9GZQ6 430 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 PCED1AQ9H1Q7 454 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 MMADHCQ9H3L0 296 aaPredicted RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 ERVMER34-1Q9H9K5 563 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 MRPL47Q9HD33 250 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 LSM7Q9UK45 103 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 NDRG2Q9UN36 371 aaKnown RBP3.67□□□□□ -1.82
APAF1-208ENST00000549007 KCNK7Q9Y2U2 307 aa3.67□□□□□ -1.82
APAF1-208ENST00000549007 A0A0U1RQK1 487 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 ZNF320A2RRD8 509 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 KCNU1A8MYU2 1149 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 PRPSAP2O60256 369 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 ACSL4O60488 711 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 TBL1XO60907 577 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 ECI2O75521 394 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 TMCC1O94876 653 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 GOSR1O95249 250 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 IGLV3-27P01718 113 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 HLA-DQA2P01906 255 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 CCR1P32246 355 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 ARL1P40616 181 aaPredicted RBP3.66□□□□□ -1.82
APAF1-208ENST00000549007 GSCP56915 257 aaPredicted RBP3.66□□□□□ -1.82
APAF1-208ENST00000549007 HOXA4Q00056 320 aaPredicted RBP3.66□□□□□ -1.82
APAF1-208ENST00000549007 KIF5AQ12840 1032 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 RALGDSQ12967 914 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 TUBA3CQ13748 450 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 FBXL22Q6P050 247 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 TUBA3EQ6PEY2 450 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 RHOUQ7L0Q8 258 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 GLRX5Q86SX6 157 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 ZNF595Q8IYB9 648 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 OR52K2Q8NGK3 314 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 CFAP61Q8NHU2 1237 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 HMGCLL1Q8TB92 370 aa3.66□□□□□ -1.82
APAF1-208ENST00000549007 DDI1Q8WTU0 396 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms