RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ANXA8L1Q5VT79 327 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 CCBE1Q6UXH8 406 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF367Q7RTV3 350 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 TSEN54Q7Z6J9 526 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 STX19Q8N4C7 294 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 C11orf65Q8NCR3 313 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 OR10G2Q8NGC3 310 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 OR4C15Q8NGM1 316 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 WDR20Q8TBZ3 569 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 SH3KBP1Q96B97 665 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF486Q96H40 463 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 ABCG8Q9H221 673 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 OR51E2Q9H255 320 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 RAD18Q9NS91 495 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 QPCTLQ9NXS2 382 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 NDUFAF4Q9P032 175 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 RBMX2Q9Y388 322 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHGB6Q9Y5F9 930 aa9.53□□□□□ -0.88
SMARCD1-205ENST00000548573 LOC100506127A0A0U1RQW1 187 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 NPIPB15A6NHN6 443 aaPredicted RBP9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 FAM47E-STBD1D6RA91 191 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 LOC110117498-PIK3R3F6TDL0 507 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 GFRA2O00451 464 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 RGS13O14921 159 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ADAM12O43184 909 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 IGSF6O95976 241 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PTHP01270 115 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 APOA1P02647 267 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 STSP08842 583 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 HSD3B1P14060 373 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ALOX12P18054 663 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ITPKAP23677 461 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 HSD3B2P26439 372 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SERPINA4P29622 427 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PFN3P60673 137 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 IRF8Q02556 426 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ACSM2AQ08AH3 577 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SF3B4Q15427 424 aaKnown RBP eCLIP9.52□□□□□ -0.881e-10■■■■□ 24.7
SMARCD1-205ENST00000548573 MICAQ29983 383 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TIMM50Q3ZCQ8 353 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ATP13A5Q4VNC0 1218 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PLEKHS1Q5SXH7 462 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 CPTPQ5TA50 214 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ACSM2BQ68CK6 577 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 C19orf48Q6RUI8 117 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 CRTC1Q6UUV9 634 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 GDPD3Q7L5L3 318 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TAS1R1Q7RTX1 841 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TSPAN33Q86UF1 283 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 HEATR4Q86WZ0 1026 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SYTL1Q8IYJ3 562 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC7A5P1Q8MH63 180 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC5A8Q8N695 610 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PIK3R3Q92569 461 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 P2RY13Q9BPV8 354 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TMEM175Q9BSA9 504 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 CENPOQ9BU64 300 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 CCDC32Q9BV29 185 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 SIAEQ9HAT2 523 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 AMBNQ9NP70 447 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 TMEM184CQ9NVA4 438 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 GPR83Q9NYM4 423 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF282Q9UDV7 671 aaPredicted RBP9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 CFL2Q9Y281 166 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 BTBD3Q9Y2F9 522 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHB7Q9Y5E2 793 aa9.52□□□□□ -0.88
SMARCD1-205ENST00000548573 PIKFYVEQ9Y2I7 2098 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 C2orf78A6NCI8 922 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 GABRR3A8MPY1 467 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 A8MX80 341 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 KPNA5O15131 536 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 KMOO15229 486 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 GCM2O75603 506 aaPredicted RBP9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 GALTP07902 379 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF24P17028 368 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 GKP32189 559 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 PIK3CBP42338 1070 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 IDH2P48735 452 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 IFITM2Q01629 132 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ST3GAL4Q11206 333 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 IFI44LQ53G44 452 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 SPANXN2Q5MJ10 180 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ZDHHC20Q5W0Z9 365 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 CCDC190Q86UF4 302 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 MMAAQ8IVH4 418 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 APCDD1Q8J025 514 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 RNF175Q8N4F7 328 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 IL17RDQ8NFM7 739 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 SPPL2AQ8TCT8 520 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 SKA2Q8WVK7 121 aaPredicted RBP9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ATL1Q8WXF7 558 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 COQ8BQ96D53 544 aa9.52□□□□□ -0.89
SMARCD1-205ENST00000548573 ASIC4Q96FT7 647 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms