RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SYCE1LA8MT33 242 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 MAP2K7O14733 419 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 CCNT2O60583 730 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 C1QL1O75973 258 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 SNRPAP09012 282 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 SLC35G6P0C7Q6 338 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 C1GALT1C1LP0DN25 315 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 SFTPCP11686 197 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 OCA2Q04671 838 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ATP1A4Q13733 1029 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 RBBP5Q15291 538 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 CPZQ66K79 652 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 KLC3Q6P597 504 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ADGRD1Q6QNK2 874 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 SHISA6Q6ZSJ9 500 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 APLFQ8IW19 511 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 AMER3Q8N944 861 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ANKRD53Q8N9V6 530 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 OR9A4Q8NGU2 314 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 STT3BQ8TCJ2 826 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 TRIM55Q9BYV6 548 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 CD244Q9BZW8 370 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 SOX17Q9H6I2 414 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ZNF358Q9NW07 568 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ZFP69BQ9UJL9 534 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 KALRNO60229 2985 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 IGLV3-12A0A075B6K2 115 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 FFAR3O14843 346 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 GPR42O15529 346 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 NDUFS4O43181 175 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 H2AFYO75367 372 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 DNAJB5O75953 348 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 SERPIND1P05546 499 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 ZGLP1P0C6A0 271 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 AHRP35869 848 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 AVPR1BP47901 424 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 AGTR2P50052 363 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 CHAF1BQ13112 559 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PWP1Q13610 501 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PDK4Q16654 411 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 VWA2Q5GFL6 755 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 LGSNQ5TDP6 509 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 ATG9BQ674R7 924 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PRSS41Q7RTY9 318 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PPP1R32Q7Z5V6 425 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 MRGPREQ86SM8 312 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 SNX31Q8N9S9 440 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 ZCCHC10Q8TBK6 192 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 MIEF2Q96C03 454 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 ING2Q9H160 280 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 TRPC4Q9UBN4 977 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 TUBD1Q9UJT1 453 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 PCSK5Q92824 1860 aa17.78■□□□□ 0.44
PRPF40B-206ENST00000547764 H0YIG0 161 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 CLGNO14967 610 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 PRAMEF4O60810 478 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 RFPL1O75677 317 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 SLU7O95391 586 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 NSA2O95478 260 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 IL1RNP18510 177 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 CXCR2P25025 360 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 MAT1AQ00266 395 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 KLC1Q07866 573 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 SLBPQ14493 270 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 SYT16Q17RD7 645 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 TECRLQ5HYJ1 363 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 PRAMEF9Q5VWM5 478 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 LRRC70Q7Z2Q7 622 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 PRSS58Q8IYP2 241 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 ZNF843Q8N446 348 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 NT5CQ8TCD5 201 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 UBTD2Q8WUN7 234 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 ABHD17AQ96GS6 310 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 IP6K3Q96PC2 410 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 EHD1Q9H4M9 534 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 FETUBQ9UGM5 382 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 MAP4K5Q9Y4K4 846 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 SLC22A7Q9Y694 548 aa17.77■□□□□ 0.44
PRPF40B-206ENST00000547764 MED13Q9UHV7 2174 aa17.77■□□□□ 0.43
PRPF40B-206ENST00000547764 KLK8O60259 260 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 COL6A2P12110 1019 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 GFAPP14136 432 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 EPORP19235 508 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 MMP11P24347 488 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 RGS1Q08116 209 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 PFKFB4Q16877 469 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 XKR6Q5GH73 641 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 TMIGD1Q6UXZ0 262 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 TIFABQ6ZNK6 161 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 MED25Q71SY5 747 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 LAPTM4BQ86VI4 370 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 PDSS2Q86YH6 399 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 TMEM102Q8N9M5 508 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 TRPV3Q8NET8 790 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 UBLCP1Q8WVY7 318 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 NACC2Q96BF6 587 aa17.76■□□□□ 0.43
PRPF40B-206ENST00000547764 MTBPQ96DY7 904 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms