RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 D6RAR5 112 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 KIF1CO43896 1103 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 LCMT2O60294 686 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 GDF9O60383 454 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SRPX2O60687 465 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 RFPL3O75679 317 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 JUNP05412 331 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SERPINA6P08185 405 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC35G6P0C7Q6 338 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 LBPP18428 481 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 PRPH2P23942 346 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 EPHA3P29320 983 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 ARFIP1P53367 373 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 STXBP1P61764 594 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 GABPB1Q06547 395 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 CUL3Q13618 768 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC9B1Q4ZJI4 515 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 TMEM35AQ53FP2 167 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 NXNQ6DKJ4 435 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 FBXO42Q6P3S6 717 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 ASCL5Q7RTU5 278 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 CACNA2D3Q8IZS8 1091 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 ANKRD53Q8N9V6 530 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 CAMKVQ8NCB2 501 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SRFBP1Q8NEF9 429 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 KLHL6Q8WZ60 621 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 N4BP2L2Q92802 583 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC41A2Q96JW4 573 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 PPM1MQ96MI6 270 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 OR2A5Q96R48 311 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 ACPTQ9BZG2 426 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 KLHL25Q9H0H3 589 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 ZNF768Q9H5H4 540 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC12A4Q9UP95 1085 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 PLCL2Q9UPR0 1127 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 TMED5Q9Y3A6 229 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 EP300Q09472 2414 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 A0A0J9YVX5 310 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 GOLGA8QA0A0J9YX86 632 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 GOLGA8OA6NCC3 632 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 GOLGA8NF8WBI6 632 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 TMX2-CTNND1H3BSU7 103 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 CTSVO60911 334 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SEMA3DO95025 777 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 MSL3P1P0C860 447 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 THRAP10827 490 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 MAPK1P28482 360 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 RPS13P62277 151 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 TGM3Q08188 693 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 CYP4F3Q08477 520 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 ZIC1Q15915 447 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SPIN4Q56A73 249 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 TCTE1Q5JU00 501 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SPDYAQ5MJ70 313 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SNAP47Q5SQN1 464 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 VWA5B1Q5TIE3 1220 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 OGFOD2Q6N063 350 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 CYB5D1Q6P9G0 228 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SCIMPQ6UWF3 145 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 Q6ZSR9 355 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 LARP4Q71RC2 724 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SPATA19Q7Z5L4 167 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 ASPGQ86U10 573 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 PLD3Q8IV08 490 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 DNAJC22Q8N4W6 341 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 NETO1Q8TDF5 533 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 SLC13A3Q8WWT9 602 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 PPP1R36Q96LQ0 422 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 C3orf30Q96M34 536 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 TMEM74Q96NL1 305 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 HBEGFQ99075 208 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 MS4A8Q9BY19 250 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 WDR55Q9H6Y2 383 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 LRTM1Q9HBL6 345 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 C1orf109Q9NX04 203 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 ATXN7L1Q9ULK2 861 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 WDFY4Q6ZS81 3184 aa15.14■□□□□ 0.01
TRAFD1-203ENST00000547063 MDC1Q14676 2089 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 IGHV5-10-1A0A0J9YXX1 117 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ATP6AP2A0A1C7CYW4 349 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 LSM1O15116 133 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ZSCAN9O15535 394 aaPredicted RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 NDUFS4O43181 175 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 SEC22BO75396 215 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ATP6AP2O75787 350 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 DCTN3O75935 186 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 MYO1DO94832 1006 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 TGFB1P01137 390 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 SERPIND1P05546 499 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 HOXB3P14651 431 aaPredicted RBP15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 RAP1GDS1P52306 607 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ERVK-8P63133 956 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 CYP4F2P78329 520 aa15.13■□□□□ 0.01
TRAFD1-203ENST00000547063 ACSM2AQ08AH3 577 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms