RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 DBF4BQ8NFT6 615 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 ZNF564Q8TBZ8 553 aaPredicted RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 URGCPQ8TCY9 931 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 ACTRT2Q8TDY3 377 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SLC20A1Q8WUM9 679 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 ROBO4Q8WZ75 1007 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 APBB2Q92870 758 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 DNASE1L2Q92874 299 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SNAPC3Q92966 411 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SPSB1Q96BD6 273 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 VCPIP1Q96JH7 1222 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 UROC1Q96N76 676 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 HNRNPABQ99729 332 aaKnown RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 OLFM1Q99784 485 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 INPP5KQ9BT40 448 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SYT11Q9BT88 431 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 TRIM7Q9C029 511 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 THAP2Q9H0W7 228 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 ISCUQ9H1K1 167 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SNX25Q9H3E2 840 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SMYD3Q9H7B4 428 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 LIN28AQ9H9Z2 209 aaKnown RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 APOBEC3GQ9HC16 384 aaKnown RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 CISD1Q9NZ45 108 aaKnown RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 NINJ2Q9NZG7 142 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 TRIM10Q9UDY6 481 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 IL19Q9UHD0 177 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SIX4Q9UIU6 781 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 LEF1Q9UJU2 399 aaPredicted RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 APPL1Q9UKG1 709 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 KIAA1257Q9ULG3 409 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 PADI3Q9ULW8 664 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 BARX2Q9UMQ3 279 aaPredicted RBP3.4□□□□□ -1.87
CUL3-215ENST00000546102 SNX12Q9UMY4 172 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 CHKBQ9Y259 395 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
CUL3-215ENST00000546102 RAP2CQ9Y3L5 183 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 HES2Q9Y543 173 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 SAR1BQ9Y6B6 198 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 WNT6Q9Y6F9 365 aa3.4□□□□□ -1.87
CUL3-215ENST00000546102 TRBV5-7A0A0A0MS05 114 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 RNF103-CHMP3A0A140T963 221 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 SMIM28A0A1B0GU29 152 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 KANSL1LA0AUZ9 987 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CTAGE15A4D2H0 777 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 GRID2IPA4D2P6 1211 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 RGSL1A5PLK6 1076 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 DPPA5A6NC42 116 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ARL5CA6NH57 179 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 KPNA7A9QM74 516 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 H7C1Q1 480 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 M0QYV0 167 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 RNF103O00237 685 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 PLOD2O00469 737 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 NDC80O14777 642 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 INPPL1O15357 1258 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 BUB1O43683 1085 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 SPOPO43791 374 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 PRAMEF11O60813 436 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 HUS1O60921 280 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 SOCS5O75159 536 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 PLAUP00749 431 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CHRNA1P02708 482 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ATP1A1P05023 1023 aaKnown RBP3.39□□□□□ -1.87
CUL3-215ENST00000546102 CYP1A2P05177 515 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CYC1P08574 325 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CTAGE8P0CG41 777 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CBSLP0DN79 551 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ODC1P11926 461 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 UNGP13051 313 aaPredicted RBP3.39□□□□□ -1.87
CUL3-215ENST00000546102 CHRNB2P17787 502 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 GNAZP19086 355 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ITIH1P19827 911 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 NMBRP28336 390 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 GABRA5P31644 462 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 RPL9P32969 192 aaKnown RBP3.39□□□□□ -1.87
CUL3-215ENST00000546102 CTNNB1P35222 781 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CBSP35520 551 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 KHKP50053 298 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ZNF81P51508 661 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 NAGLUP54802 743 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CASP9P55211 416 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 C21orf58P58505 322 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 KIAA1024LP59773 190 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 HNRNPKP61978 463 aaKnown RBP eCLIP3.39□□□□□ -1.87
CUL3-215ENST00000546102 HSPB3Q12988 150 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 RPS6KA1Q15418 735 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 MYLK3Q32MK0 819 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 KBTBD12Q3ZCT8 623 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 FAM153CQ494X1 144 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 CFAP221Q4G0U5 840 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 XKR4Q5GH76 650 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 ENTPD8Q5MY95 495 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 SEL1L2Q5TEA6 688 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 HECTD2Q5U5R9 776 aa3.39□□□□□ -1.87
CUL3-215ENST00000546102 PAPD7Q5XG87 772 aaKnown RBP3.39□□□□□ -1.87
CUL3-215ENST00000546102 DNAJC24Q6P3W2 148 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms