RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CDK9P50750 372 aaKnown RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CAMK2BQ13554 666 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 GPNMBQ14956 572 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TPSAB1Q15661 275 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RAB41Q5JT25 222 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ZCCHC12Q6PEW1 402 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DPY19L3Q6ZPD9 716 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CUZD1Q86UP6 607 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TRPV3Q8NET8 790 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TOR1AIP2Q8NFQ8 470 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 MAGEE2Q8TD90 523 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RLN3Q8WXF3 142 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SLC38A4Q969I6 547 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 MAP3K3Q99759 626 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ACSS3Q9H6R3 686 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 NKIRAS2Q9NYR9 191 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 EBF1Q9UH73 591 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SPIN1Q9Y657 262 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ELOA3DA6NLF2 546 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ANKRD66B4E2M5 251 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ACOT7O00154 380 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TOR1BO14657 336 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 POLR1CO15160 346 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CER1O95813 267 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ATP1B2P14415 290 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CD247P20963 164 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 MPP1Q00013 466 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 FCHO2Q0JRZ9 810 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ELOA3BQ3SY89 546 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DCUN1D3Q8IWE4 304 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DNAJC5GQ8N7S2 189 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DTX3Q8N9I9 347 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 FAM47BQ8NA70 645 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ELOA3Q8NG57 546 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 PSMA8Q8TAA3 256 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ESAMQ96AP7 390 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 LINC00597Q9H2U6 94 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SLCO3A1Q9UIG8 710 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ADAMTS6Q9UKP5 1117 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 OAS3Q9Y6K5 1087 aaKnown RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 HHLA1C9JL84 531 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 H3BUI4 141 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 GNB5O14775 395 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 PDPK1O15530 556 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SERPINA3P01011 423 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 C5AR1P21730 350 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 EPHA3P29320 983 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 AP1S2P56377 157 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 XIAPP98170 497 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 FAM209AQ5JX71 171 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 IL23RQ5VWK5 629 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DHRSXQ8N5I4 330 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 METTL27Q8N6F8 245 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 POC5Q8NA72 575 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 OR2AJ1Q8NGZ0 328 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 HM13Q8TCT9 377 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RORBQ92753 470 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DLG3Q92796 817 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 FGF13Q92913 245 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RGMAQ96B86 450 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CMKLR1Q99788 373 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ZBP1Q9H171 429 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 B3GAT2Q9NPZ5 323 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CLN6Q9NWW5 311 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RUVBL1Q9Y265 456 aaKnown RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ACTL7AQ9Y615 435 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 NUP205Q92621 2012 aa8.34□□□□□ -1.08
CLIP1-218ENST00000545889 CCDC162PA2VCL2 907 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 FAM155BO75949 473 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 TGFB1P01137 390 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 STATHP02808 62 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 NR2C1P13056 603 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 GKP32189 559 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 GTF2H2Q13888 395 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 CCNIQ14094 377 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 DECR1Q16698 335 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 ARMCX4Q5H9R4 360 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 GTF2H2CQ6P1K8 395 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 DRICH1Q6PGQ1 229 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-218ENST00000545889 IKBIPQ70UQ0 350 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 OR2T3Q8NH03 318 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 SORCS1Q8WY21 1168 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 NXNL1Q96CM4 212 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 CKLFQ9UBR5 152 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 PHF11Q9UIL8 331 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 MAFFQ9ULX9 164 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 ARL5AQ9Y689 179 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 SCDO00767 359 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 ALOX15BO15296 676 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 NADKO95544 446 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-218ENST00000545889 DBIP07108 87 aaKnown RBP8.33□□□□□ -1.08
CLIP1-218ENST00000545889 GLDCP23378 1020 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 STK19P49842 368 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-218ENST00000545889 CDKN1CP49918 316 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-218ENST00000545889 COX10Q12887 443 aa8.33□□□□□ -1.08
CLIP1-218ENST00000545889 COL13A1Q5TAT6 717 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms