RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RAB36O95755 333 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 TNFP01375 233 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 SWI5Q1ZZU3 235 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF404Q494X3 552 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 OGFRL1Q5TC84 451 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-209ENST00000545689 NDC1Q9BTX1 674 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 COMMD3Q9UBI1 195 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 PCDHGB6Q9Y5F9 930 aa12.14□□□□□ -0.47
COL4A6-209ENST00000545689 DSG2Q14126 1118 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 MINDY4Q4G0A6 757 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ASRGL1Q7L266 308 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 LINGO2Q7L985 606 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TMEM145Q8NBT3 493 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OR5AK3PQ8NH89 298 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OSTF1Q92882 214 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 NLGN3Q9NZ94 848 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ACSL5Q9ULC5 683 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 DFNA5O60443 496 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-209ENST00000545689 RYKP34925 604 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TPTEP56180 551 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TAS2R50P59544 299 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TXNL4AP83876 142 aaKnown RBP12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF33BQ06732 778 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TSTQ16762 297 aaKnown RBP12.13□□□□□ -0.47
COL4A6-209ENST00000545689 DNM1P34Q6PK57 102 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OR2AJ1Q8NGZ0 328 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 FATE1Q969F0 183 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 DGAT2Q96PD7 388 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 CLCC1Q96S66 551 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ADAP2Q9NPF8 381 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 A0A1W2PQ45 241 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-209ENST00000545689 A0A1W2PQY0 241 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 TYRP14679 529 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ACTR1BP42025 376 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 NRG3P56975 720 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ACTR1AP61163 376 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ADAM15Q13444 863 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 SYVN1Q86TM6 617 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 NEK7Q8TDX7 302 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OR5P2Q8WZ92 322 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 CDH7Q9ULB5 785 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 A0A1W2PRG6 482 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OR14I1A6ND48 311 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 CAPN5O15484 640 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-209ENST00000545689 SUOXP51687 545 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 CLCNKAP51800 687 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 RAB7BQ96AH8 199 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 GAL3ST4Q96RP7 486 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 MMP27Q9H306 513 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ACTL8Q9H568 366 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 B4GALT6Q9UBX8 382 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 COCHO43405 550 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 ADAM17P78536 824 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 POMZP3Q6PJE2 187 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 PKP4Q99569 1192 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 PRRG4Q9BZD6 226 aa12.13□□□□□ -0.47
COL4A6-209ENST00000545689 C6orf47O95873 294 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 OPN1SWP03999 348 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 GDF5P43026 501 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MAGEA6P43360 314 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SLC15A1P46059 708 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 KIAA1161Q6NSJ0 714 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 NOXRED1Q6NXP6 359 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CDHR3Q6ZTQ4 885 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 FBXO15Q8NCQ5 510 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ADAMTS5Q9UNA0 930 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MEMO1Q9Y316 297 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 UBR2Q8IWV8 1755 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF670-ZNF695F2Z2N8 137 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 NR2C1P13056 603 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 HSD17B1P14061 328 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MATN1P21941 496 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CCKBRP32239 447 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF45Q02386 682 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 PUDPQ08623 228 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF252P-AS1Q0IIN9 211 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 TRAM2Q15035 370 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MEP1AQ16819 746 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ENPP7Q6UWV6 458 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BIRC8Q96P09 236 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 FAAHO00519 579 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 F8A1P23610 371 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 GNALP38405 381 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CSTF1Q05048 431 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms