RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 FADS2P1A8MWK0 482 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 CCL16O15467 120 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SUV39H1O43463 412 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 IGFBP1P08833 259 aaPredicted RBP14.5□□□□□ -0.09
USP28-214ENST00000545540 GABARAPL2P60520 117 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 AGTRAPQ6RW13 159 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 FAM124AQ86V42 546 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 MFSD4AQ8N468 514 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 TCEAL4Q96EI5 215 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 OTUB1Q96FW1 271 aaPredicted RBP14.5□□□□□ -0.09
USP28-214ENST00000545540 RDH14Q9HBH5 336 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SPASTQ9UBP0 616 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 LSM7Q9UK45 103 aaKnown RBP14.5□□□□□ -0.09
USP28-214ENST00000545540 PLAGL1Q9UM63 463 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 FRMPD3Q5JV73 1810 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SOBPA7XYQ1 873 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 M0QX08 132 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 C6orf47O95873 294 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 HLA-EP13747 358 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 PRPS1L1P21108 318 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SLC6A12P48065 614 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 TMED10P49755 219 aaKnown RBP14.5□□□□□ -0.09
USP28-214ENST00000545540 HBA1P69905 142 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SPIBQ01892 262 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 OXA1LQ15070 435 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 DGUOKQ16854 277 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SYTL3Q4VX76 610 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 DYNC2LI1Q8TCX1 351 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 NEIL2Q969S2 332 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 YIPF6Q96EC8 236 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 SLC46A2Q9BY10 475 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 MAGIXQ9H6Y5 334 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 QPCTLQ9NXS2 382 aa14.5□□□□□ -0.09
USP28-214ENST00000545540 NDRG4Q9ULP0 352 aaKnown RBP14.5□□□□□ -0.09
USP28-214ENST00000545540 PRAMEF25A6NGN4 478 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 TTC34A8MYJ7 566 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 KPNA4O00629 521 aaPredicted RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 STATHP02808 62 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 CYP2A7P20853 494 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 SOAT1P35610 550 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 MAGEA2P43356 314 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 KCNJ10P78508 379 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 DEFB103AP81534 67 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 LRRC74AQ0VAA2 488 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 TOP3AQ13472 1001 aaPredicted RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 DOC2BQ14184 412 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 LEXMQ3ZCV2 418 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 Q6ZNB5 142 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 BCDIN3DQ7Z5W3 292 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 CRIPAKQ8N1N5 446 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 SETD9Q8NE22 299 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 NFKBIDQ8NI38 313 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 CNDP2Q96KP4 475 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 MRPL9Q9BYD2 267 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 ELAC1Q9H777 363 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 HMX1Q9NP08 348 aaPredicted RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 GPATCH2Q9NW75 528 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 MYO9BQ13459 2157 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 MICAL3Q7RTP6 2002 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 TNFRSF11BO00300 401 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 PCDH17O14917 1159 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 AIREO43918 545 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 ADRA2AP08913 450 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 CCR2P41597 374 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 RAE1P78406 368 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 GRIN2CQ14957 1233 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 SPATC1Q76KD6 591 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 UBTD2Q8WUN7 234 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 MRPS31Q92665 395 aaKnown RBP14.49□□□□□ -0.09
USP28-214ENST00000545540 TESCQ96BS2 214 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 BTBD2Q9BX70 525 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 ANAPC1Q9H1A4 1944 aa14.49□□□□□ -0.09
USP28-214ENST00000545540 SMIM30A4D0T7 59 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 LEFTY2O00292 366 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 LEFTY1O75610 366 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 CYP7B1O75881 506 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 JUPP14923 745 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TPTEP56180 551 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 LRRC70Q7Z2Q7 622 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 WDR48Q8TAF3 677 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 C7orf34Q96L11 122 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 IL17FQ96PD4 163 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 IL4I1Q96RQ9 567 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SLIRPQ9GZT3 109 aaKnown RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 FAM83DQ9H4H8 585 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 CFAP20Q9Y6A4 193 aaKnown RBP14.48□□□□□ -0.09
USP28-214ENST00000545540 PNMA8CA0A1B0GUJ8 204 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 M0R082 166 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TLL1O43897 1013 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TPST2O60704 377 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 SPNP16150 400 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 RCVRNP35243 200 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 TM4SF4P48230 202 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 NKX3-2P78367 333 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 RGNQ15493 299 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 PRSS53Q2L4Q9 553 aa14.48□□□□□ -0.09
USP28-214ENST00000545540 CBLL1Q75N03 491 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms