RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DLX5P56178 289 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 TAS2R50P59544 299 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 CTSL3PQ5NE16 218 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 ACAD11Q709F0 780 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 VSTM4Q8IW00 320 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 SULF2Q8IWU5 870 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 RPRMLQ8N4K4 120 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 TAB3Q8N5C8 712 aaPredicted RBP13.81□□□□□ -0.2
RTN3-214ENST00000545432 MCOLN3Q8TDD5 553 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 ZNF480Q8WV37 535 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 THAP11Q96EK4 314 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
RTN3-214ENST00000545432 ALPK1Q96QP1 1244 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 PKP4Q99569 1192 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 EBNA1BP2Q99848 306 aaKnown RBP13.81□□□□□ -0.2
RTN3-214ENST00000545432 TREX1Q9NSU2 369 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 TMEM184CQ9NVA4 438 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 DNAJB12Q9NXW2 375 aaKnown RBP13.81□□□□□ -0.2
RTN3-214ENST00000545432 TAC3Q9UHF0 121 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 L3MBTL1Q9Y468 752 aa13.81□□□□□ -0.2
RTN3-214ENST00000545432 FLNAP21333 2647 aaKnown RBP13.81□□□□□ -0.2
RTN3-214ENST00000545432 DNAJC13O75165 2243 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 ZNF839A8K0R7 811 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 GOLGA6L19H0YKK7 550 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 HRH2P25021 359 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 ADAM8P78325 824 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 NSDHLQ15738 373 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 CAVIN1Q6NZI2 390 aaKnown RBP13.8□□□□□ -0.2
RTN3-214ENST00000545432 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 PDSS2Q86YH6 399 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 PLD3Q8IV08 490 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 SKA2Q8WVK7 121 aaPredicted RBP13.8□□□□□ -0.2
RTN3-214ENST00000545432 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
RTN3-214ENST00000545432 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
RTN3-214ENST00000545432 VPS13CQ709C8 3753 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 FN1P02751 2386 aaKnown RBP13.79□□□□□ -0.2
RTN3-214ENST00000545432 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 FAM90A27PA6NNH2 459 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 USP27XA6NNY8 438 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 KLRC4-KLRK1H3BQV0 150 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 SGK494L7N484 410 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 PROM1O43490 865 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 ZWINTO95229 277 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 SLC16A8O95907 504 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 GAS8O95995 478 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 STIP1P31948 543 aaKnown RBP13.79□□□□□ -0.2
RTN3-214ENST00000545432 FDFT1P37268 417 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 CETN2P41208 172 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 MEOX1P50221 254 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 NUP107P57740 925 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 ABRAXAS2Q15018 415 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 CCDC71Q8IV32 467 aaPredicted RBP13.79□□□□□ -0.2
RTN3-214ENST00000545432 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 NFAM1Q8NET5 270 aaPredicted RBP13.79□□□□□ -0.2
RTN3-214ENST00000545432 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 LPGAT1Q92604 370 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 FAM129AQ9BZQ8 928 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 LIME1Q9H400 295 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 CHRAC1Q9NRG0 131 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 FAM114A2Q9NRY5 505 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 HCN3Q9P1Z3 774 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 PCDHA13Q9Y5I0 950 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
RTN3-214ENST00000545432 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
RTN3-214ENST00000545432 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 H3BMM5 538 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 H7BY64 318 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 TFECO14948 347 aaPredicted RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 PEX1O43933 1283 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 HS6ST1O60243 411 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 PRMT3O60678 531 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 IL1RNP18510 177 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 ARNTP27540 789 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 SKIV2L2P42285 1042 aaKnown RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 ITGA8P53708 1063 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 OR4D2P58180 307 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 RPS15AP62244 130 aaKnown RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 MEF2AQ02078 507 aaPredicted RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 LTBQ06643 244 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 ACTN3Q08043 901 aaPredicted RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 PMPCAQ10713 525 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 TBX2Q13207 712 aaPredicted RBP13.78□□□□□ -0.2
RTN3-214ENST00000545432 RPS6KA1Q15418 735 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 TYSND1Q2T9J0 566 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 CAMKMTQ7Z624 323 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 KIF2BQ8N4N8 673 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 OR52N2Q8NGI0 321 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 TSLPQ969D9 159 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 TMEM125Q96AQ2 219 aa13.78□□□□□ -0.2
RTN3-214ENST00000545432 PRAP1Q96NZ9 151 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms