RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ADAMTS6Q9UKP5 1117 aa7.05□□□□□ -1.28
CPSF7-224ENST00000544990 TCFL5Q9UL49 500 aa7.05□□□□□ -1.28
CPSF7-224ENST00000544990 PDE10AQ9Y233 779 aa7.05□□□□□ -1.28
CPSF7-224ENST00000544990 PSAT1Q9Y617 370 aa7.05□□□□□ -1.28
CPSF7-224ENST00000544990 A0A1B0GX78 115 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 TCRBV9S1A1TA0A576 114 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 HYKKA2RU49 373 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FITM1A5D6W6 292 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FAM159BA6NKW6 160 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 TXNDC9O14530 226 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 DSCR3O14972 297 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 CTSVO60911 334 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 TSPAN12O95859 305 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 PRB1P04280 392 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 EIF2S1P05198 315 aaKnown RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FAM87AP0C7U9 286 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 EZRP15311 586 aaKnown RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 ZNF37AP17032 561 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 PHBP35232 272 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SPRP35270 261 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 GRK3P35626 688 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 GP5P40197 560 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 POLE2P56282 527 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 TAS2R39P59534 338 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 RPS18P62269 152 aaKnown RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 NAE1Q13564 534 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 USP10Q14694 798 aaKnown RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SSPNQ14714 243 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 NCF4Q15080 339 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 TRADDQ15628 312 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 MUM1Q2TAK8 710 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 NKAIN1Q4KMZ8 207 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 ATP1A1-AS1Q5TC04 95 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 GRTP1Q5TC63 336 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 PRAMEF13Q5VWM6 474 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FRMPD2BQ6IN97 320 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 LCN10Q6JVE6 187 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 CAPN13Q6MZZ7 669 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FBXO42Q6P3S6 717 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 LCTLQ6UWM7 567 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 ZDHHC24Q6UX98 284 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 PAQR7Q86WK9 346 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 C17orf64Q86WR6 236 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 RAB43Q86YS6 212 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 LRRC56Q8IYG6 542 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-224ENST00000544990 CEP112Q8N8E3 955 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 EXD3Q8N9H8 876 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 ZNF285Q96NJ3 590 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 IP6K3Q96PC2 410 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FANCD2OSQ96PS1 177 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 RUFY1Q96T51 708 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 RBBP8Q99708 897 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 HAUS8Q9BT25 410 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 ATG10Q9H0Y0 220 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SLC25A18Q9H1K4 315 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 LRRC4CQ9HCJ2 640 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SLC6A20Q9NP91 592 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 STARD5Q9NSY2 213 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 CDC14AQ9UNH5 594 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 MAN2B2Q9Y2E5 1009 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 CORINQ9Y5Q5 1042 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 FER1L5A0AVI2 2057 aa7.04□□□□□ -1.28
CPSF7-224ENST00000544990 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-224ENST00000544990 H0YGG7 62 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 MKRN2OSH3BPM6 223 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 H7BY64 318 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 PRPF4O43172 522 aaKnown RBP eCLIP7.03□□□□□ -1.285e-6■□□□□ 10.8
CPSF7-224ENST00000544990 GUCA1CO95843 209 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 IGHEP01854 428 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 CAPN1P07384 714 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ANXA5P08758 320 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 FURINP09958 794 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 STMN1P16949 149 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ITGAXP20702 1163 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 FOLR3P41439 243 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 PGGT1BP53609 377 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 GPX6P59796 221 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ARF3P61204 181 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-224ENST00000544990 TBPL1P62380 186 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 YBX1P67809 324 aaKnown RBP7.03□□□□□ -1.28
CPSF7-224ENST00000544990 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 NAB1Q13506 487 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 NDUFA9Q16795 377 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 PHKG1Q16816 387 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 KBTBD12Q3ZCT8 623 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 TMEM201Q5SNT2 666 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ZBTB37Q5TC79 503 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 GARNL3Q5VVW2 1013 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 ZNF425Q6IV72 752 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 PRMT9Q6P2P2 845 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 FAM198BQ6UWH4 519 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 TMEM207Q6UWW9 146 aa7.03□□□□□ -1.28
CPSF7-224ENST00000544990 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms