RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 INPP1P49441 399 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 MGAT3Q09327 533 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 TNK1Q13470 666 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMG8-202ENST00000543872 LRRC66Q68CR7 880 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 FAHD1Q6P587 224 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 ZNF367Q7RTV3 350 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 SLC37A3Q8NCC5 494 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 ATP6V1C2Q8NEY4 427 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 ATP13A1Q9HD20 1204 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 EIF3KQ9UBQ5 218 aaKnown RBP12.25□□□□□ -0.45
SMG8-202ENST00000543872 CLEC2DQ9UHP7 191 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 DLGAP4Q9Y2H0 992 aa12.25□□□□□ -0.45
SMG8-202ENST00000543872 PSIP1O75475 530 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 PKMP14618 531 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 ENGP17813 658 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PNPLA4P41247 253 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 MAP2K3P46734 347 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CLCN7P51798 805 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CXCL9Q07325 125 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 ZRANB3Q5FWF4 1079 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 LCN1P1Q5VSP4 162 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 ANKRD53Q8N9V6 530 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OR9Q1Q8NGQ5 310 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 FBXW5Q969U6 566 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 B3GALT6Q96L58 329 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CLMPQ9H6B4 373 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PLCXD1Q9NUJ7 323 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 TTC3P53804 2025 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 LOC102723532A0A0G2JNH3 316 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OR5K4A6NMS3 321 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 WNT9AO14904 365 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 FGF10O15520 208 aaPredicted RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 GPR39O43194 453 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 GLUD1P00367 558 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OTCP00480 354 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OPN1SWP03999 348 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CPN2P22792 545 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 WARSP23381 471 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 TACR1P25103 407 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PSMA1P25786 263 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 HLA-DMAP28067 261 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OR1E2P47887 323 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PGFP49763 221 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CAV3P56539 151 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 ZXDBP98169 803 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 LARS2Q15031 903 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.24□□□□□ -0.45
SMG8-202ENST00000543872 ZNF284Q2VY69 593 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PIANPQ8IYJ0 282 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 LINC00518Q8N0U6 118 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OR10G2Q8NGC3 310 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 MAGEB10Q96LZ2 347 aaPredicted RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 SERHL2Q9H4I8 314 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 SLC35C2Q9NQQ7 365 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 TMEM45AQ9NWC5 275 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 COMMD3Q9UBI1 195 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CFAP20Q9Y6A4 193 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 SBF1O95248 1867 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CLIC1O00299 241 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 MYL12BO14950 172 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 PLOD3O60568 738 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 MYL12AP19105 171 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 CDH12P55289 794 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 VMACQ2NL98 169 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 ANKRD54Q6NXT1 300 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 ARSKQ6UWY0 536 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 GPR65Q8IYL9 337 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 OR6C4Q8NGE1 309 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 HASPINQ8TF76 798 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMG8-202ENST00000543872 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 KCNH6Q9H252 994 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 SERHLQ9NQF3 203 aa12.24□□□□□ -0.45
SMG8-202ENST00000543872 NDRG2Q9UN36 371 aaKnown RBP12.24□□□□□ -0.45
SMG8-202ENST00000543872 TRBV5-3A0A0A0MS03 114 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 NUPL2O15504 423 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 FABP7O15540 132 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 TSPAN12O95859 305 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZNF30P17039 623 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ETV1P50549 477 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 RPS14P62263 151 aaKnown RBP12.23□□□□□ -0.45
SMG8-202ENST00000543872 SLC39A12Q504Y0 691 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ZBTB37Q5TC79 503 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 LIPKQ5VXJ0 399 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 NOTUMQ6P988 496 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 PTCHD4Q6ZW05 846 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
SMG8-202ENST00000543872 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms