RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SPINT1O43278 529 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 LILRB5O75023 590 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 C1orf105O95561 183 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CPSF4O95639 269 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SOD1P00441 154 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PRNPP04156 253 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ANXA4P09525 319 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 INHBBP09529 407 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PCMT1P22061 227 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PRKACGP22612 351 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 RPL3P39023 403 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 DGKGP49619 791 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ENTPD1P49961 510 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 DAPP51397 102 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PLA2G16P53816 162 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 TBPL1P62380 186 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 VLDLRP98155 873 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PPP1R8Q12972 351 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 RAPSNQ13702 412 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 DHCR24Q15392 516 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF829Q3KNS6 432 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 IQCCQ4KMZ1 466 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PAGE2BQ5JRK9 111 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 FAHD1Q6P587 224 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CEP68Q76N32 757 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 LAS2Q8IYD9 372 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 DRAXINQ8NBI3 349 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 FNDC8Q8TC99 324 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ZFP90Q8TF47 636 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 NEIL2Q969S2 332 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF514Q96K75 400 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 LINC00615Q96LM1 132 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 NODALQ96S42 347 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PITX2Q99697 317 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SGPP1Q9BX95 441 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 C11orf49Q9H6J7 331 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PALMDQ9NP74 551 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ENAMQ9NRM1 1142 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 GULP1Q9UBP9 304 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 VPS4AQ9UN37 437 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 BTBD3Q9Y2F9 522 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 TSC22D4Q9Y3Q8 395 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 KIAA1549LQ6ZVL6 1849 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 MGAT4DA6NG13 374 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 GABRR3A8MPY1 467 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 TMX2-CTNND1H3BSU7 103 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PCDH7O60245 1069 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ANGPTL1O95841 491 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CYP17A1P05093 508 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ADH5P11766 374 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 AGXTP21549 392 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ITGB7P26010 798 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CLK1P49759 484 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 RAB15P59190 212 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ST8SIA6P61647 398 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF763Q0D2J5 394 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 GAB1Q13480 694 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 GRIN2CQ14957 1233 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 RGNQ15493 299 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 MOGQ16653 247 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ANKRD26P1Q6NSI1 321 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 TMPRSS11BQ86T26 416 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 NAT16Q8N8M0 369 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 VN1R2Q8NFZ6 395 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 BORCS5Q969J3 196 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 FKBP10Q96AY3 582 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 EPYCQ99645 322 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 APOL4Q9BPW4 351 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DUSP21Q9H596 190 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 REEP1Q9H902 201 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CCNB1IP1Q9NPC3 277 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ITM2CQ9NQX7 267 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PAK1IP1Q9NWT1 392 aaPredicted RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 FAM8A1Q9UBU6 413 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ENPP5Q9UJA9 477 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 NDRG4Q9ULP0 352 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 FZD4Q9ULV1 537 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PADI2Q9Y2J8 665 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DYRK1BQ9Y463 629 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 C17orf113A0A1B0GUU1 675 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ZBBXA8MT70 800 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF197O14709 1029 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ADH1CP00326 375 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 C1QCP02747 245 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 C9P02748 559 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CD247P20963 164 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PDHA2P29803 388 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 WEE1P30291 646 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 IRS1P35568 1242 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 GALK1P51570 392 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 RPS13P62277 151 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms