RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 NANOGNBQ7Z5D8 188 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 DTX3Q8N9I9 347 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 PXYLP1Q8TE99 480 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 ACPTQ9BZG2 426 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
VARS2-212ENST00000542001 UTS2RQ9UKP6 389 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 CABIN1Q9Y6J0 2220 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 LCKP06239 509 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 TIE1P35590 1138 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 MAGEA12P43365 314 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 CTSCP53634 463 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 CXorf57Q6NSI4 855 aaKnown RBP15.57■□□□□ 0.08
VARS2-212ENST00000542001 TBPL2Q6SJ96 375 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 HUS1BQ8NHY5 278 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 POF1BQ8WVV4 589 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 FEVQ99581 238 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 C17orf62Q9BQA9 187 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 FAIM2Q9BWQ8 316 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 POLR2J2Q9GZM3 115 aaKnown RBP15.57■□□□□ 0.08
VARS2-212ENST00000542001 AGPAT4Q9NRZ5 378 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 MARCH5Q9NX47 278 aa15.57■□□□□ 0.08
VARS2-212ENST00000542001 ZW10O43264 779 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 RHOP08100 348 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 PDHA2P29803 388 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 DCTP40126 519 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 AP1S2P56377 157 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 DSC1Q08554 894 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 MTAPQ13126 283 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CBX3Q13185 183 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 LASP1Q14847 261 aaKnown RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 ZSWIM7Q19AV6 140 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 PRAMEF14Q5SWL7 426 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 PRAMEF13Q5VWM6 474 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 KLHL17Q6TDP4 642 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 IQCHQ86VS3 1027 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CENPSQ8N2Z9 138 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ADAMTS15Q8TE58 950 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 F2RL3Q96RI0 385 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 NDEL1Q9GZM8 345 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 OLAHQ9NV23 265 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 TMX2-CTNND1H3BSU7 103 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 AP3D1O14617 1153 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 PSIP1O75475 530 aaKnown RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 NR2F6P10588 404 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 GTF2E2P29084 291 aaKnown RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 GRM2Q14416 872 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 NFE2L1Q14494 772 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 FAM131AQ6UXB0 335 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 PLEKHM3Q6ZWE6 761 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 LRRC70Q7Z2Q7 622 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ZNF551Q7Z340 670 aaPredicted RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 SGCDQ92629 289 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 NUS1Q96E22 293 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 BARD1Q99728 777 aaKnown RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 CCM2Q9BSQ5 444 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ANKRD60Q9BZ19 345 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CORO2BQ9UQ03 480 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 SPACA6W5XKT8 324 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CASKO14936 926 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 VILLO15195 856 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ERI3O43414 337 aaKnown RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 VIPR1P32241 457 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 SHMT2P34897 504 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 SPINT3P49223 89 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CLCN4P51793 760 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 RGS8P57771 180 aaPredicted RBP15.56■□□□□ 0.08
VARS2-212ENST00000542001 TUBA4AP68366 448 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 SLC13A2Q13183 592 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 TIMM50Q3ZCQ8 353 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 USP30Q70CQ3 517 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 BEND5Q7L4P6 421 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ZZZ3Q8IYH5 903 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 WDR48Q8TAF3 677 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 UBE2FQ969M7 185 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 TTTY10Q9BZA0 68 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 GULP1Q9UBP9 304 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 CCL26Q9Y258 94 aa15.56■□□□□ 0.08
VARS2-212ENST00000542001 ZNF860A6NHJ4 632 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 A8MV72 311 aaPredicted RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 RASGRP1O95267 797 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 MATN4O95460 622 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 IFNA16P05015 189 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SDC1P18827 310 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 FPR1P21462 350 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 PCDH1Q08174 1060 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 GALNT1Q10472 559 aaPredicted RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 ANGPT1Q15389 498 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CMPK2Q5EBM0 449 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 KIAA1161Q6NSJ0 714 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CHERPQ8IWX8 916 aaKnown RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 HDDC3Q8N4P3 179 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 LMLNQ96KR4 655 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 BIRC8Q96P09 236 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 TMEM175Q9BSA9 504 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CAB39Q9Y376 341 aaPredicted RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 H3BSH0 61 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 PI15O43692 258 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 STSP08842 583 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 GGT1P19440 569 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 PRSS58Q8IYP2 241 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms