RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 B4GAT1O43505 415 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 G6PDP11413 515 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 AMD1P17707 334 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 SHMT2P34897 504 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 KIAA0040Q15053 153 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 PDCD4Q53EL6 469 aaKnown RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 ICE2Q659A1 982 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 ZNF740Q8NDX6 193 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 ABHD11Q8NFV4 315 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 UTP4Q969X6 686 aaKnown RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 CMTM7Q96FZ5 175 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 CADM1Q9BY67 442 aaKnown RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 MAGEB17A8MXT2 336 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 PRICKLE3O43900 615 aaPredicted RBP26.64■■□□□ 1.85
CCM2-218ENST00000541586 SNRPB2P08579 225 aaKnown RBP26.64■■□□□ 1.85
CCM2-218ENST00000541586 KRT16P08779 473 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 GPR3P46089 330 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 PRDX1Q06830 199 aaKnown RBP26.64■■□□□ 1.85
CCM2-218ENST00000541586 RCN3Q96D15 328 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 SLC45A3Q96JT2 553 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 ABCG4Q9H172 646 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 SRMSQ9H3Y6 488 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 BRF2Q9HAW0 419 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 OR6C2Q9NZP2 312 aa26.64■■□□□ 1.85
CCM2-218ENST00000541586 EIF3LQ9Y262 564 aaKnown RBP26.64■■□□□ 1.85
CCM2-218ENST00000541586 SPAARA0A1B0GVQ0 90 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 GSC2O15499 205 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 UBXN7O94888 489 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 HSD3B1P14060 373 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 PNLIPP16233 465 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 HSD3B2P26439 372 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 PEBP1P30086 187 aaKnown RBP26.63■■□□□ 1.85
CCM2-218ENST00000541586 SLC25A3Q00325 362 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 CYP20A1Q6UW02 462 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 USP53Q70EK8 1073 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 ZNF438Q7Z4V0 828 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 TEX37Q96LM6 180 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 ZMYND15Q9H091 742 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 SPHK1Q9NYA1 384 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 VPS29Q9UBQ0 182 aa26.63■■□□□ 1.85
CCM2-218ENST00000541586 COL5A1P20908 1838 aaPredicted RBP26.62■■□□□ 1.85
CCM2-218ENST00000541586 AIM2O14862 343 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 CSRP1P21291 193 aaKnown RBP26.62■■□□□ 1.85
CCM2-218ENST00000541586 NOVA1P51513 510 aaKnown RBP26.62■■□□□ 1.85
CCM2-218ENST00000541586 CCR8P51685 355 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 UFM1P61960 85 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 CCL7P80098 99 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 C10orf62Q5T681 223 aaPredicted RBP26.62■■□□□ 1.85
CCM2-218ENST00000541586 SPRED1Q7Z699 444 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 KRT78Q8N1N4 520 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 OR10G6Q8NH81 332 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 UBE2E3Q969T4 207 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 APIPQ96GX9 242 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 SLC25A23Q9BV35 468 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 UCK1Q9HA47 277 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 ASIC5Q9NY37 505 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 ZIM2Q9NZV7 527 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 CEP250Q9BV73 2442 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 H7BY64 318 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 ZW10O43264 779 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 SLC22A3O75751 556 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 DNAL1Q4LDG9 190 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 TMIGD1Q6UXZ0 262 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 OR4K1Q8NGD4 311 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 NCSTNQ92542 709 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 PRAP1Q96NZ9 151 aa26.62■■□□□ 1.85
CCM2-218ENST00000541586 RAB3IPQ96QF0 476 aaPredicted RBP26.62■■□□□ 1.85
CCM2-218ENST00000541586 IGHV1OR21-1A0A087WYE8 117 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 DCDC2BA2VCK2 349 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 OR6C74A6NCV1 312 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 LILRA5A6NI73 299 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 C9JVG2 144 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 H0YHG0 523 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 ETHE1O95571 254 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 RPLP0P05388 317 aaKnown RBP26.61■■□□□ 1.85
CCM2-218ENST00000541586 CHRM5P08912 532 aaPredicted RBP26.61■■□□□ 1.85
CCM2-218ENST00000541586 ITGAXP20702 1163 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 NUDT2P50583 147 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 SIM1P81133 766 aaPredicted RBP26.61■■□□□ 1.85
CCM2-218ENST00000541586 STX5Q13190 355 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 CACHD1Q5VU97 1274 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 PROKR1Q8TCW9 393 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 AIF1LQ9BQI0 150 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 PRM3Q9NNZ6 103 aa26.61■■□□□ 1.85
CCM2-218ENST00000541586 IGKV1-8A0A0C4DH67 115 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 FOXE1O00358 373 aaPredicted RBP26.6■■□□□ 1.85
CCM2-218ENST00000541586 NR5A2O00482 541 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 PROS1P07225 676 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 CEACAM1P13688 526 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 RPS13P62277 151 aaKnown RBP26.6■■□□□ 1.85
CCM2-218ENST00000541586 NR1D2Q14995 579 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 BLOC1S3Q6QNY0 202 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 ADGRF3Q8IZF5 1079 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 LIX1Q8N485 282 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 RSC1A1Q92681 617 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 NPAS2Q99743 824 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 LRRN3Q9H3W5 708 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 ACTL8Q9H568 366 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 EFCAB1Q9HAE3 211 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 HRASLS2Q9NWW9 162 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms