RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 OR2T29Q8NH02 315 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ZFP90Q8TF47 636 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 FIG4Q92562 907 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 EDEM1Q92611 657 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 TTC9Q92623 222 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 NCLNQ969V3 563 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 CEP19Q96LK0 163 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 AGAP4Q96P64 663 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PITX2Q99697 317 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 YIPF2Q9BWQ6 316 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 NDEL1Q9GZM8 345 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 SLIRPQ9GZT3 109 aaKnown RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 SIK2Q9H0K1 926 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 DCSTAMPQ9H295 470 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 TMEM245Q9H330 911 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 TUBB1Q9H4B7 451 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ARMC7Q9H6L4 198 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 NEK6Q9HC98 313 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ACOT13Q9NPJ3 140 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 SEMA4BQ9NPR2 832 aaPredicted RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 C1orf109Q9NX04 203 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 KIF17Q9P2E2 1029 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 SEC14L4Q9UDX3 406 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PHF11Q9UIL8 331 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 MAN2B2Q9Y2E5 1009 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 CCDC163A0A0D9SF12 145 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 SH3D21A4FU49 640 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TTC34A8MYJ7 566 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 EIF3FO00303 357 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 MUSKO15146 869 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 ZW10O43264 779 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 UGT2B17O75795 530 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 CCNKO75909 580 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 INMTO95050 263 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 KLF8O95600 359 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 LATS1O95835 1130 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TBX18O95935 607 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 GOT2P00505 430 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 CYP17A1P05093 508 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PKMP14618 531 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 CD36P16671 472 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 CD86P42081 329 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 WASP42768 502 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 YAP1P46937 504 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 UGT2B15P54855 530 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PITX1P78337 314 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 AQP6Q13520 282 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 STARD3Q14849 445 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 OR4D1Q15615 310 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TRIP4Q15650 581 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 SMAD1Q15797 465 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 PCSK7Q16549 785 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 AP5B1Q2VPB7 878 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 ADPRMQ3LIE5 342 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 C10orf120Q5SQS8 335 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 LRIF1Q5T3J3 769 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 CCNJQ5T5M9 372 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 PMS2CLQ68D20 193 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 KDM4DQ6B0I6 523 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TBPL2Q6SJ96 375 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TCAIMQ8N3R3 496 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 NAT16Q8N8M0 369 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 ANGPTL6Q8NI99 470 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PSMA8Q8TAA3 256 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 EXT2Q93063 718 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 BHMTQ93088 406 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 FUBP1Q96AE4 644 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 PLD4Q96BZ4 506 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 MOCOSQ96EN8 888 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 COL21A1Q96P44 957 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 ADGRE3Q9BY15 652 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 AMBRA1Q9C0C7 1298 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 REEP1Q9H902 201 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 NT5MQ9NPB1 228 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 IL1RAPQ9NPH3 570 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 MARCH2Q9P0N8 246 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 KLHL42Q9P2K6 505 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 TRPS1Q9UHF7 1281 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 NDRG4Q9ULP0 352 aaKnown RBP10.06□□□□□ -0.8
CHFR-219ENST00000541341 BTBD3Q9Y2F9 522 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PCDHGB2Q9Y5G2 931 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PCDHGA5Q9Y5G8 931 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 LYVE1Q9Y5Y7 322 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 DGKBQ9Y6T7 804 aa10.06□□□□□ -0.8
CHFR-219ENST00000541341 PTPRBP23467 1997 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 GON4LQ3T8J9 2241 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 OR2A25A4D2G3 310 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 ASPDHA6ND91 283 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 METTL15A6NJ78 407 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 E5RI56 91 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 NPIPB8E9PQR5 432 aa10.05□□□□□ -0.8
CHFR-219ENST00000541341 BTN3A1O00481 513 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms