RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 HSD3B1P14060 373 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 HOXB6P17509 224 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 HSD3B2P26439 372 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 SERPINB1P30740 379 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 GMPRP36959 345 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 HNF4AP41235 474 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 METAP1P53582 386 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CDH13P55290 713 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 KCNK10P57789 538 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 KCNJ2P63252 427 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 PHEXP78562 749 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CCL7P80098 99 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 B4GALNT1Q00973 533 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 EMX2Q04743 252 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CDC20Q12834 499 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CNTN1Q12860 1018 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 LAPTM5Q13571 262 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CUL3Q13618 768 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 ARHGAP19Q14CB8 494 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 NR0B2Q15466 257 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 INPP5JQ15735 1006 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 IMPG1Q17R60 797 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 VWA5B1Q5TIE3 1220 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 LIPJQ5W064 366 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 PNCKQ6P2M8 343 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 TMEM220Q6QAJ8 160 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 GOLGA7Q7Z5G4 137 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 TREML1Q86YW5 311 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 KIF2BQ8N4N8 673 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 IL22RA1Q8N6P7 574 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 RBM15BQ8NDT2 890 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 DENND6BQ8NEG7 585 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 ZNF548Q8NEK5 533 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 OR2L2Q8NH16 312 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 SCAMP4Q969E2 229 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 LENG8Q96PV6 779 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 SLC30A3Q99726 388 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 MIPEPQ99797 713 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 THTPAQ9BU02 230 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 WRAP53Q9BUR4 548 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 RAB11FIP5Q9BXF6 653 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CADM1Q9BY67 442 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 TRIM15Q9C019 465 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 STRADBQ9C0K7 418 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 PITHD1Q9GZP4 211 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 ELOVL6Q9H5J4 265 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 ZNF385DQ9H6B1 395 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 NOL11Q9H8H0 719 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 AKTIPQ9H8T0 292 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 ACTR8Q9H981 624 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 SDR39U1Q9NRG7 319 aaPredicted RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 EVA1BQ9NVM1 165 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 NOP53Q9NZM5 478 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 LUZP4Q9P127 313 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 GALPQ9UBC7 116 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 STOML1Q9UBI4 398 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 ADGRE2Q9UHX3 823 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 CD84Q9UIB8 345 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 KLF15Q9UIH9 416 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 COPG1Q9Y678 874 aaKnown RBP8.06□□□□□ -1.12
CHD4-208ENST00000540960 KCNE2Q9Y6J6 123 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 PRSS21Q9Y6M0 314 aa8.06□□□□□ -1.12
CHD4-208ENST00000540960 SLC5A10A0PJK1 596 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 NCF1BA6NI72 391 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 NCF1CA8MVU1 366 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 FADS2P1A8MWK0 482 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PRSS44E7EML9 344 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 NPIPB8E9PQR5 432 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 CACNB4O00305 520 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 UBFD1O14562 309 aaKnown RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 PIP5K1BO14986 540 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 NRP2O60462 931 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 MMP20O60882 483 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SKAP2O75563 359 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 MYO1DO94832 1006 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SORBS2O94875 1100 aaKnown RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 GUCA1CO95843 209 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PRPS2P11908 318 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 CD99P14209 185 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 NCF1P14598 390 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 CXCR2P25025 360 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 HNRNPH1P31943 449 aaKnown RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 GNPDA1P46926 289 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 AP2B1P63010 937 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 LRRC74AQ0VAA2 488 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PRKG2Q13237 762 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PTPRRQ15256 657 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 HIST2H2ACQ16777 129 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 PDCD4Q53EL6 469 aaKnown RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 AGKQ53H12 422 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 XKR7Q5GH72 579 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SAMD4BQ5PRF9 694 aaKnown RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 PIP5KL1Q5T9C9 394 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 C1orf146Q5VVC0 180 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 HIST2H2AA3Q6FI13 130 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 CAPN13Q6MZZ7 669 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms