RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 SLC25A24Q6NUK1 477 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 HTR3DQ70Z44 454 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 NRROSQ86YC3 692 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 GEMIN6Q8WXD5 167 aaKnown RBP13.65□□□□□ -0.22
USP3-204ENST00000540797 PTCHD1Q96NR3 888 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 TRBC2A0A5B9 178 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 FAM170BA6NMN3 283 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 HAT1O14929 419 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 MATN1P21941 496 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 MNDAP41218 407 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 EPGNQ6UW88 154 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 SLC36A4Q6YBV0 504 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 OR10H4Q8NGA5 316 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 DPH7Q9BTV6 452 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 TPT1P8Q9HAU6 139 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP3-204ENST00000540797 TCHHQ07283 1943 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 SDC3O75056 442 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 ANXA8P13928 327 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 ZNF252P-AS1Q0IIN9 211 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 CRB2Q5IJ48 1285 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 PDSS1Q5T2R2 415 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 ADGRD2Q7Z7M1 963 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 TRMT2BQ96GJ1 504 aaKnown RBP13.65□□□□□ -0.22
USP3-204ENST00000540797 RNF121Q9H920 327 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 RAB26Q9ULW5 256 aa13.65□□□□□ -0.22
USP3-204ENST00000540797 TBPL1P62380 186 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 LASP1Q14847 261 aaKnown RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 LPAL2Q16609 132 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 PLEKHG4BQ96PX9 1271 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 ACTL7AQ9Y615 435 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 MYH3P11055 1940 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 NOBOXO60393 691 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 CDC123O75794 336 aaPredicted RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 ARSDP51689 593 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 ITGADQ13349 1161 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 FAM26DQ5JW98 314 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 ANKRD26P1Q6NSI1 321 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 GHDCQ8N2G8 530 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 OR10G2Q8NGC3 310 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 HLA-CQ95604 372 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 GIN1Q9NXP7 522 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 ATXN10Q9UBB4 475 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 FBLP22087 321 aaKnown RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 CPXM2Q8N436 756 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 RHEBL1Q8TAI7 183 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 HIST1H2AAQ96QV6 131 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 RSL24D1Q9UHA3 163 aaKnown RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 AQP12BA6NM10 295 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 ADAM12O43184 909 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 OR2B3O76000 313 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 RSL1D1O76021 490 aaKnown RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 APBB3O95704 486 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 RBM44Q6ZP01 1051 aaKnown RBP13.64□□□□□ -0.23
USP3-204ENST00000540797 TMEM135Q86UB9 458 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 AQP12AQ8IXF9 295 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 ZDHHC1Q8WTX9 485 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 HHIPQ96QV1 700 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 PKP4Q99569 1192 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 REEP4Q9H6H4 257 aa13.64□□□□□ -0.23
USP3-204ENST00000540797 HIDE1A8MVS5 230 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 M0QX08 132 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 ASNA1O43681 348 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 PSMA1P25786 263 aaKnown RBP13.63□□□□□ -0.23
USP3-204ENST00000540797 HHEXQ03014 270 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 PDCD4Q53EL6 469 aaKnown RBP13.63□□□□□ -0.23
USP3-204ENST00000540797 KRT74Q7RTS7 529 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 ZSCAN1Q8NBB4 408 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 MGME1Q9BQP7 344 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 SLC39A3Q9BRY0 314 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 HERPUD2Q9BSE4 406 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 COMMD4Q9H0A8 199 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 TPK1Q9H3S4 243 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 H0YC42 278 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 KCNJ5P48544 419 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 PLXDC1Q8IUK5 500 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 SHKBP1Q8TBC3 707 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 PTGES2Q9H7Z7 377 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 SMURF2Q9HAU4 748 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 PAIP2BQ9ULR5 123 aaKnown RBP13.63□□□□□ -0.23
USP3-204ENST00000540797 SPIN1Q9Y657 262 aaPredicted RBP13.63□□□□□ -0.23
USP3-204ENST00000540797 TNFRSF10BO14763 440 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 ARPC2O15144 300 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 KCNJ13O60928 360 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 H1F0P07305 194 aaKnown RBP13.63□□□□□ -0.23
USP3-204ENST00000540797 LINGO3P0C6S8 592 aa13.63□□□□□ -0.23
USP3-204ENST00000540797 GP1BBP13224 206 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms