RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SLC16A12Q6ZSM3 486 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 CFAP206Q8IYR0 622 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SLC15A4Q8N697 577 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 DNAJB8Q8NHS0 232 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 FKBP10Q96AY3 582 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 FCRL1Q96LA6 429 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SPNS1Q9H2V7 528 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ACSL6Q9UKU0 697 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 EXO1Q9UQ84 846 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 RUVBL1Q9Y265 456 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 AP3M1Q9Y2T2 418 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 MUC22E2RYF6 1773 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 KPNA5O15131 536 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SLC16A6O15403 523 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ATG13O75143 517 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 BCAS1O75363 584 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TGFB1P01137 390 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 EPS8Q12929 822 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 DGCR6Q14129 220 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 GRHL2Q6ISB3 625 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SFTPA1Q8IWL2 248 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 MUL1Q969V5 352 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 CIDECQ96AQ7 238 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 NRBF2Q96F24 287 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 CCM2Q9BSQ5 444 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ZSCAN5AQ9BUG6 496 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR2AG1Q9H205 316 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR51B5Q9H339 312 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 PRDM8Q9NQV8 689 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM184CQ9NVA4 438 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 KIF17Q9P2E2 1029 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 DKK3Q9UBP4 350 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 PCDHB11Q9Y5F2 797 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 GMPPBQ9Y5P6 360 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 MGAT4DA6NG13 374 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TRIM64BA6NI03 449 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 NPIPB8E9PQR5 432 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TLL1O43897 1013 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 PCDH7O60245 1069 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 CATP04040 527 aaKnown RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 INHBBP09529 407 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 IDSP22304 550 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 CD6P30203 668 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR1E2P47887 323 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 DGKGP49619 791 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 CCDC71Q8IV32 467 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 MMP21Q8N119 569 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TTC29Q8NA56 475 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF740Q8NDX6 193 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR8J2Q8NGG1 315 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR4A15Q8NGL6 344 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 OR5AK3PQ8NH89 298 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 WDR48Q8TAF3 677 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF480Q8WV37 535 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 FAR1Q8WVX9 515 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 ZFYVE19Q96K21 471 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SORBS1Q9BX66 1292 aaKnown RBP11.09□□□□□ -0.63
C11orf54-214ENST00000540113 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 PSME2Q9UL46 239 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
C11orf54-214ENST00000540113 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GCM2O75603 506 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 MYO1DO94832 1006 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 FADS2O95864 444 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SEMG1P04279 462 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 HNRNPA1P09651 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ETFAP13804 333 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 FUT4P22083 530 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TGFBR1P36897 503 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 NNMTP40261 264 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 CRATP43155 626 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 C21orf59P57076 290 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TBPL1P62380 186 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PCM1Q15154 2024 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 NPTX1Q15818 432 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PRSS53Q2L4Q9 553 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 CBLL1Q75N03 491 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 RTL10Q7L3V2 364 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GPR155Q7Z3F1 870 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 BTLAQ7Z6A9 289 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TRAPPC5Q8IUR0 188 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 FAM9CQ8IZT9 166 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 OR52J3Q8NH60 311 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GIPC3Q8TF64 312 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 C11orf24Q96F05 449 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 IL17FQ96PD4 163 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 VPS35Q96QK1 796 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms