RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 NXT1Q9UKK6 140 aaKnown RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 CDC14AQ9UNH5 594 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 SPENQ96T58 3664 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 SOCS6O14544 535 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 STK16O75716 305 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 WDR47O94967 919 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 PRB1P04280 392 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 INHBAP08476 426 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ZGLP1P0C6A0 271 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 TYK2P29597 1187 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 MSH2P43246 934 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 HSPA7P48741 367 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 MEF2AQ02078 507 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 CDC16Q13042 620 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 KCNAB2Q13303 367 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 NAA30Q147X3 362 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 RASA2Q15283 850 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 UAP1Q16222 522 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 FAM83EQ2M2I3 478 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ADPRMQ3LIE5 342 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 TAF1BQ53T94 588 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 RAPH1Q70E73 1250 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 FRA10AC1Q70Z53 315 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 PRSS41Q7RTY9 318 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ADCK2Q7Z695 626 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 MRGPREQ86SM8 312 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ASPGQ86U10 573 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 PDSS2Q86YH6 399 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 SHISA5Q8N114 240 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 CNPY4Q8N129 248 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 TMEM102Q8N9M5 508 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 STT3BQ8TCJ2 826 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 SLC13A3Q8WWT9 602 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ESAMQ96AP7 390 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 MRRFQ96E11 262 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 CABS1Q96KC9 395 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 EGFL8Q99944 293 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 MACROD1Q9BQ69 325 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 DRC3Q9H069 523 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 CNOT10Q9H9A5 744 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 DNAJC11Q9NVH1 559 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ZNF358Q9NW07 568 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 NDOR1Q9UHB4 597 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 ZNF490Q9ULM2 529 aaPredicted RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 RNF112Q9ULX5 631 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
CD9-208ENST00000538834 HS3ST3B1Q9Y662 390 aa13.01□□□□□ -0.33
CD9-208ENST00000538834 PRRC2CQ9Y520 2896 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 A0A0A6YYC8 382 aaPredicted RBP13□□□□□ -0.33
CD9-208ENST00000538834 PABPN1LA6NDY0 278 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 ESPNB1AK53 854 aa13□□□□□ -0.33
CD9-208ENST00000538834 TRIM49D1C9J1S8 452 aa13□□□□□ -0.33
CD9-208ENST00000538834 I3L1I5 382 aaPredicted RBP13□□□□□ -0.33
CD9-208ENST00000538834 UBXN8O00124 270 aa13□□□□□ -0.33
CD9-208ENST00000538834 KRT38O76015 456 aa13□□□□□ -0.33
CD9-208ENST00000538834 CYC1P08574 325 aa13□□□□□ -0.33
CD9-208ENST00000538834 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 GSTM2P28161 218 aa13□□□□□ -0.33
CD9-208ENST00000538834 GRK3P35626 688 aa13□□□□□ -0.33
CD9-208ENST00000538834 FOLR3P41439 243 aa13□□□□□ -0.33
CD9-208ENST00000538834 AGTR2P50052 363 aa13□□□□□ -0.33
CD9-208ENST00000538834 SETDB1Q15047 1291 aa13□□□□□ -0.33
CD9-208ENST00000538834 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
CD9-208ENST00000538834 FBXO48Q5FWF7 155 aa13□□□□□ -0.33
CD9-208ENST00000538834 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
CD9-208ENST00000538834 LRRC70Q7Z2Q7 622 aa13□□□□□ -0.33
CD9-208ENST00000538834 VN1R5Q7Z5H4 357 aa13□□□□□ -0.33
CD9-208ENST00000538834 LAPTM4BQ86VI4 370 aa13□□□□□ -0.33
CD9-208ENST00000538834 RAB43Q86YS6 212 aa13□□□□□ -0.33
CD9-208ENST00000538834 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 UHMK1Q8TAS1 419 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 ALKBH8Q96BT7 664 aaKnown RBP13□□□□□ -0.33
CD9-208ENST00000538834 TSNARE1Q96NA8 513 aa13□□□□□ -0.33
CD9-208ENST00000538834 AIF1LQ9BQI0 150 aa13□□□□□ -0.33
CD9-208ENST00000538834 SLC25A18Q9H1K4 315 aa13□□□□□ -0.33
CD9-208ENST00000538834 RHBGQ9H310 441 aa13□□□□□ -0.33
CD9-208ENST00000538834 MKKSQ9NPJ1 570 aaPredicted RBP13□□□□□ -0.33
CD9-208ENST00000538834 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
CD9-208ENST00000538834 CD274Q9NZQ7 290 aa13□□□□□ -0.33
CD9-208ENST00000538834 ZNF282Q9UDV7 671 aaPredicted RBP13□□□□□ -0.33
CD9-208ENST00000538834 GPN3Q9UHW5 284 aaPredicted RBP13□□□□□ -0.33
CD9-208ENST00000538834 TLK1Q9UKI8 766 aa13□□□□□ -0.33
CD9-208ENST00000538834 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
CD9-208ENST00000538834 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
CD9-208ENST00000538834 DYRK1BQ9Y463 629 aa13□□□□□ -0.33
CD9-208ENST00000538834 MAU2Q9Y6X3 613 aa13□□□□□ -0.33
CD9-208ENST00000538834 LOC102723996A0A087X1L8 192 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 NCF1BA6NI72 391 aaPredicted RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 SYCE1LA8MT33 242 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 NCF1CA8MVU1 366 aaPredicted RBP12.99□□□□□ -0.33
CD9-208ENST00000538834 C4orf51C9J302 202 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 POC1B-GALNT4F8VUJ3 575 aa12.99□□□□□ -0.33
CD9-208ENST00000538834 K7EM74 188 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms