RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 C2CD4AQ8NCU7 369 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 SIMC1Q8NDZ2 872 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SCGB1C1Q8TD33 95 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 MUS81Q96NY9 551 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FRG2BQ96QU4 278 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 LIN28AQ9H9Z2 209 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 GBA2Q9HCG7 927 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 HHATLQ9HCP6 504 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZDHHC3Q9NYG2 299 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ACSL5Q9ULC5 683 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ABCC6O95255 1503 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PCDH17O14917 1159 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SYN3O14994 580 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PROM1O43490 865 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 EIF2DP41214 584 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 CLCN7P51798 805 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 KEAP1Q14145 624 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 EIF4HQ15056 248 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 ALG1LQ6GMV1 187 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SLC2A7Q6PXP3 512 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ABHD13Q7L211 337 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 MMAAQ8IVH4 418 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 HS3ST5Q8IZT8 346 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PROKR2Q8NFJ6 384 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 GPN2Q9H9Y4 310 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 TIGARQ9NQ88 270 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 GRXCR2A6NFK2 248 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZNF878C9JN71 531 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CLUP10909 449 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 HSD17B1P14061 328 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FOSL1P15407 271 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CSNK2A2P19784 350 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 CDK2P24941 298 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ASPAP45381 313 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SOX9P48436 509 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NCS1P62166 190 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 UGCGQ16739 394 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FAM69AQ5T7M9 428 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NCBP2-AS2Q69YL0 99 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ANKRD54Q6NXT1 300 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PHTF2Q8N3S3 785 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 BEST4Q8NFU0 473 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 MFSD8Q8NHS3 518 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SLC6A16Q9GZN6 736 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 MKRN2Q9H000 416 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 PPIL3Q9H2H8 161 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 MEPEQ9NQ76 525 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 DDX4Q9NQI0 724 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 WASF3Q9UPY6 502 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 KIF1AQ12756 1690 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 TRAV6A0A075B6T7 132 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 LCHNA4D1U4 455 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 OR1F1O43749 312 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 AOC2O75106 756 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 RASGRP1O95267 797 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 OAS1P00973 400 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 UQCRC2P22695 453 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 RBMXP38159 391 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZNF460Q14592 562 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 METTL11BQ5VVY1 283 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 GOLGA7Q7Z5G4 137 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NPAS3Q8IXF0 933 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 RASGEF1AQ8N9B8 481 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CHDHQ8NE62 594 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 NEIL3Q8TAT5 605 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 DPF3Q92784 378 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NKD1Q969G9 470 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SLC22A18Q96BI1 424 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 COQ8BQ96D53 544 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NTPCRQ9BSD7 190 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 DPCDQ9BVM2 203 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 FUNDC2Q9BWH2 189 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZNF436Q9C0F3 470 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 OR51E2Q9H255 320 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 TLE6Q9H808 572 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ABCB8Q9NUT2 735 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 AFDNP55196 1824 aaKnown RBP6.71□□□□□ -1.33
SORT1-209ENST00000538502 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 H7C417 338 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 J3QLW9 94 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 PHYHO14832 338 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 ZNF19P17023 458 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 PPM1AP35813 382 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 STT3AP46977 705 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 AVPR1BP47901 424 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 DAOAP59103 153 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 ST3GAL4Q11206 333 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 BTG3Q14201 252 aaPredicted RBP6.71□□□□□ -1.33
SORT1-209ENST00000538502 TMEM198Q66K66 360 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 FIP1L1Q6UN15 594 aaKnown RBP6.71□□□□□ -1.33
SORT1-209ENST00000538502 TSPYL5Q86VY4 417 aaPredicted RBP6.71□□□□□ -1.33
SORT1-209ENST00000538502 SNX29P2Q8IUI4 249 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 NFKBIDQ8NI38 313 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 SNX27Q96L92 541 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 ZNF382Q96SR6 550 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 PIP5K1AQ99755 562 aa6.71□□□□□ -1.33
SORT1-209ENST00000538502 COPS7AQ9UBW8 275 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms