RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF763Q0D2J5 394 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 CNTN1Q12860 1018 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 PMS2P3Q13401 168 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 BIRC2Q13490 618 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 TSTA3Q13630 321 aaPredicted RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 RBBP5Q15291 538 aaKnown RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 PAGE2BQ5JRK9 111 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 ADAMTSL4Q6UY14 1074 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 DCP2Q8IU60 420 aaKnown RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 ERI1Q8IV48 349 aaKnown RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 CXorf40AQ8TE69 158 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 SUSD6Q92537 303 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 RAB7BQ96AH8 199 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 CHFRQ96EP1 664 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 CCDC177Q9NQR7 707 aaPredicted RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 THAP10Q9P2Z0 257 aaPredicted RBP13.48□□□□□ -0.25
LIMK1-208ENST00000538333 C3orf18Q9UK00 162 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 RPS6KA6Q9UK32 745 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 FZD4Q9ULV1 537 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 DOCK9Q9BZ29 2069 aa13.48□□□□□ -0.25
LIMK1-208ENST00000538333 TBC1D3BA6NDS4 549 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 C1QTNF3-AMACRE9PGA6 284 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 HS6ST1O60243 411 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CPNE6O95741 557 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 NUDT7P0C024 238 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 POLR2IP36954 125 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CRYBA2P53672 197 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ERVK-21P61565 698 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 VLDLRP98155 873 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 TMEM259Q4ZIN3 620 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 VITQ6UXI7 678 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 VTCN1Q7Z7D3 282 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 DSG4Q86SJ6 1040 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 GOT1L1Q8NHS2 421 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ISOC1Q96CN7 298 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ERLEC1Q96DZ1 483 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 BHLHE41Q9C0J9 482 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ING2Q9H160 280 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 GDE1Q9NZC3 331 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 TGFB1P01137 390 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 EPHX1P07099 455 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CRHBPP24387 322 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 DRD3P35462 400 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 MVDP53602 400 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 MEF2AQ02078 507 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 PDE7AQ13946 482 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 RAB39AQ14964 217 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 RGNQ15493 299 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 RBM48Q5RL73 367 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 OR2T5Q6IEZ7 315 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CEP68Q76N32 757 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CLVS1Q8IUQ0 354 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF740Q8NDX6 193 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 CHDHQ8NE62 594 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF555Q8NEP9 628 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 OR2T29Q8NH02 315 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 WDR48Q8TAF3 677 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 SETD7Q8WTS6 366 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 IL17FQ96PD4 163 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 BARD1Q99728 777 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 LIN28AQ9H9Z2 209 aaKnown RBP13.47□□□□□ -0.25
LIMK1-208ENST00000538333 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 SH3BP4Q9P0V3 963 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 SLC23A2Q9UGH3 650 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
LIMK1-208ENST00000538333 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 LOC100130705A0A1B0GUX0 176 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 SLC16A6O15403 523 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 PI15O43692 258 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 GBAP04062 536 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 FURINP09958 794 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 ERGP11308 486 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 IL7RP16871 459 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 TTKP33981 857 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 GJA4P35212 333 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 PIK3CBP42338 1070 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 ISL1P61371 349 aa13.46□□□□□ -0.25
LIMK1-208ENST00000538333 LRRC74AQ0VAA2 488 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms