RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ATL1Q8WXF7 558 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 DNASE1L2Q92874 299 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 RPL3LQ92901 407 aaKnown RBP13.81□□□□□ -0.2
USP44-203ENST00000537435 RIOK2Q9BVS4 552 aaKnown RBP13.81□□□□□ -0.2
USP44-203ENST00000537435 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 BRF2Q9HAW0 419 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 SH3BP4Q9P0V3 963 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 ZNF451Q9Y4E5 1061 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 PCDHGA6Q9Y5G7 932 aa13.81□□□□□ -0.2
USP44-203ENST00000537435 TMEM247A6NEH6 219 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 TMEM229AB2RXF0 380 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 DPM1O60762 260 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 ABCB1P08183 1280 aaPredicted RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 IDSP22304 550 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CTSCP53634 463 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 INAQ16352 499 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 GPR153Q6NV75 609 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 Q6ZPB1 254 aaPredicted RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 ZBTB8BQ8NAP8 495 aaPredicted RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 TMEM159Q96B96 161 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 TAMM41Q96BW9 452 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 METTL2AQ96IZ6 378 aaKnown RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CORO2BQ9UQ03 480 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 OR2A25A4D2G3 310 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 MGAT4DA6NG13 374 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 E9PQ18 207 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 SERPINB7O75635 380 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 SLC16A8O95907 504 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CATP04040 527 aaKnown RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 BMP4P12644 408 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CD36P16671 472 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 PPIBP23284 216 aaKnown RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 IMPA1P29218 277 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 TGFBR1P36897 503 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
USP44-203ENST00000537435 CASP9P55211 416 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 DCDC1P59894 354 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 IFITM3Q01628 133 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 BRAT1Q6PJG6 821 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 ANGPTL8Q6UXH0 198 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CAMKMTQ7Z624 323 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 FAM124AQ86V42 546 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 P3H2Q8IVL5 708 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 MFSD4AQ8N468 514 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 TRAM1L1Q8N609 369 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 OR7G3Q8NG95 312 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 OR6Q1Q8NGQ2 317 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 SPPL2AQ8TCT8 520 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 CHTF18Q8WVB6 975 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 LGALS12Q96DT0 336 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 HRASLS5Q96KN8 279 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 KCNC2Q96PR1 638 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 SIGLEC11Q96RL6 698 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 DOHHQ9BU89 302 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 BTBD2Q9BX70 525 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 GABARAPL3Q9BY60 117 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 FBXO8Q9NRD0 319 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 RNF6Q9Y252 685 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 PADI2Q9Y2J8 665 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 PCDHGB3Q9Y5G1 929 aa13.8□□□□□ -0.2
USP44-203ENST00000537435 KIAA1671Q9BY89 1806 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 PCDH7O60245 1069 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 GCM2O75603 506 aaPredicted RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 VIPP01282 170 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 OPN1SWP03999 348 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 CTSAP10619 480 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 PCGF2P35227 344 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TGFBR2P37173 567 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 HENMT1Q5T8I9 393 aaKnown RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 CNKSR3Q6P9H4 555 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TSEN54Q7Z6J9 526 aaKnown RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 RASGEF1AQ8N9B8 481 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 C11orf65Q8NCR3 313 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 COQ8BQ96D53 544 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 PKP4Q99569 1192 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 CORO1BQ9BR76 489 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TMEM184CQ9NVA4 438 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 ZNF282Q9UDV7 671 aaPredicted RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TESMINQ9Y4I5 508 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 KRBA1A5PL33 1030 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 ZBBXA8MT70 800 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TNFRSF11BO00300 401 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 LEFTY1O75610 366 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 LAG3P18627 525 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TNFRSF1BP20333 461 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TIA1P31483 386 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP44-203ENST00000537435 GRK3P35626 688 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 RPS13P62277 151 aaKnown RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms