RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HSPA7P48741 367 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 LHX1P48742 406 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC25A52Q3SY17 297 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TOR2AQ5JU69 321 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 KANK2Q63ZY3 851 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PQLC3Q8N755 202 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CLDN22Q8N7P3 220 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GTF2H4Q92759 462 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 REPS1Q96D71 796 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 EXOC2Q96KP1 924 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SECISBP2Q96T21 854 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TMED9Q9BVK6 235 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 DNMT3LQ9UJW3 386 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MGAT4AQ9UM21 535 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 HES2Q9Y543 173 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RGPD3A6NKT7 1758 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RGPD4Q7Z3J3 1758 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 A8MVJ9 347 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MEN1O00255 615 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 MUSKO15146 869 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GOT2P00505 430 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 OR56A5P0C7T3 313 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GGT1P19440 569 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 BUD31P41223 144 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CPT1AP50416 773 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 GP2P55259 537 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF648Q5T619 568 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TSTD2Q5T7W7 516 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ANXA8L1Q5VT79 327 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 CES4AQ5XG92 561 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 PCNPQ8WW12 178 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ZDHHC15Q96MV8 337 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SERPINB11Q96P15 392 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF416Q9BWM5 594 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ASPNQ9BXN1 380 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SLC6A17Q9H1V8 727 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ELAC1Q9H777 363 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 SEMA3GQ9NS98 782 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 THUMPD1Q9NXG2 353 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 RPL36Q9Y3U8 105 aaKnown RBP5.24□□□□□ -1.57
PTPRD-213ENST00000537002 H7C0S8 307 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SEC14L5O43304 696 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 KPNA6O60684 536 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GADD45GO95257 159 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 AHSGP02765 367 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 INSRRP14616 1297 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 RABGGTBP53611 331 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 EPHA4P54764 986 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GRB7Q14451 532 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PXDC1Q5TGL8 231 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FKBP1CQ5VVH2 108 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ENPP6Q6UWR7 440 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 METTL7BQ6UX53 244 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 KRT77Q7Z794 578 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PIM3Q86V86 326 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ENAMQ9NRM1 1142 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 RBFOX1Q9NWB1 397 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 LYARQ9NX58 379 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FZD10Q9ULW2 581 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DDX60LQ5H9U9 1706 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 KANTRA0A1W2PQU2 76 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 KCNK2O95069 426 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC25A27O95847 323 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GPX3P22352 226 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PPIBP23284 216 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 OXTRP30559 389 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DPP6P42658 865 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DSC2Q02487 901 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 WSCD1Q658N2 575 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PTERQ96BW5 349 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PITX2Q99697 317 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 BRINP2Q9C0B6 783 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 EMC7Q9NPA0 242 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NUDT4Q9NZJ9 180 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TNFSF13BQ9Y275 285 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 OR2AT4A6NND4 320 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TOR1AO14656 332 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ANXA3P12429 323 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ANXA8P13928 327 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 BDNFP23560 247 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ACVR2AP27037 513 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TTPAP49638 278 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SMIM11AP58511 58 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 AAK1Q2M2I8 961 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 IFI44LQ53G44 452 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 HECTD3Q5T447 861 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 APOBEC3HQ6NTF7 200 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC46A3Q7Z3Q1 461 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ATAD1Q8NBU5 361 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PEBP4Q96S96 227 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC30A3Q99726 388 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CDADC1Q9BWV3 514 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 MROH8Q9H579 483 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 BRD7Q9NPI1 651 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 MS4A12Q9NXJ0 267 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHB8Q9UN66 801 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TCRBV5S2A0A599 114 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SCAMP3O14828 347 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TLR5O60602 858 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 LCKP06239 509 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms