RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZNF524Q96C55 264 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 LGALS12Q96DT0 336 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 LPAR4Q99677 370 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 THAP2Q9H0W7 228 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 NAPBQ9H115 298 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 EPHA6Q9UF33 1036 aa4.82□□□□□ -1.64
PRKDC-208ENST00000536710 PFASO15067 1338 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 RPGRIP1LQ68CZ1 1315 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 TRBV4-1A0A0J9YWV2 114 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 SYCE3A1L190 88 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 MAGEB16A2A368 324 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 BLOC1S5-TXNDC5H3BN57 136 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PCDH7O60245 1069 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 OLFM2O95897 454 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 FAM157CP0CG43 387 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 SLC2A2P11168 524 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-208ENST00000536710 OR3A3P47888 321 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 FKBP1BP68106 108 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 SP3Q02447 781 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 SGCGQ13326 291 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 FFAR4Q5NUL3 377 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 KCTD11Q693B1 232 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PLBD1Q6P4A8 553 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 FCRLAQ7L513 359 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 TMEM126BQ8IUX1 230 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 TDHQ8IZJ6 230 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 MARVELD2Q8N4S9 558 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 TCEANCQ8N8B7 351 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 OR1L3Q8NH93 324 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 ARHGAP45Q92619 1136 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 DYRK2Q92630 601 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 NECTIN4Q96NY8 510 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 GAL3ST4Q96RP7 486 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 ATP6V0BQ99437 205 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PRMT1Q99873 361 aaKnown RBP4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PI4K2AQ9BTU6 479 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PITPNM3Q9BZ71 974 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 NYXQ9GZU5 481 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 P2RY12Q9H244 342 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 TBC1D13Q9NVG8 400 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 PRDM4Q9UKN5 801 aa4.81□□□□□ -1.64
PRKDC-208ENST00000536710 A0A087X0K7 114 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 C5orf51A6NDU8 294 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ANTXRLA6NF34 631 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 A8MVM7 634 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 FAM72CH0Y354 149 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 KIF5CO60282 957 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 GRAP2O75791 330 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ZNF432O94892 652 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 LETM1O95202 739 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 EML2O95834 649 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 GAS8O95995 478 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 CD48P09326 243 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ERVK-10P10266 1014 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 CD59P13987 128 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 RBMS1P29558 406 aaKnown RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 RPP38P78345 283 aaKnown RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 GFPT1Q06210 699 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 TMEM132DQ14C87 1099 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 PPA1Q15181 289 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ZNF74Q16587 644 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 HFEQ30201 348 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 FAM72AQ5TYM5 149 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 AGAP6Q5VW22 663 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ETFRF1Q6IPR1 90 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 FAM72DQ6L9T8 149 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 PRSS42Q7Z5A4 293 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ASPGQ86U10 573 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 FAM72BQ86X60 149 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 SERPINA12Q8IW75 414 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 DCUN1D3Q8IWE4 304 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 CNTN4Q8IWV2 1026 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 GPC2Q8N158 579 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 THEM5Q8N1Q8 247 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 RAB42Q8N4Z0 105 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 CLEC1AQ8NC01 280 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 NEK11Q8NG66 645 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 APOBEC4Q8WW27 367 aaKnown RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 FAM46BQ96A09 425 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 CFAP36Q96G28 342 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 NEDD4LQ96PU5 975 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 PRAM1Q96QH2 718 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 NKX3-1Q99801 234 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 PIGQQ9BRB3 760 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ACPTQ9BZG2 426 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 C5orf66Q9H5L9 145 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 EGLN3Q9H6Z9 239 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 MRPL17Q9NRX2 175 aaKnown RBP4.8□□□□□ -1.64
PRKDC-208ENST00000536710 EXOC1Q9NV70 894 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 PANK4Q9NVE7 773 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 DNAJC11Q9NVH1 559 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 MAD2L2Q9UI95 211 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 EXOC6BQ9Y2D4 811 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ZNF510Q9Y2H8 683 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 TMED7Q9Y3B3 224 aa4.8□□□□□ -1.64
PRKDC-208ENST00000536710 ABCC9O60706 1549 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms