RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 KCND3Q9UK17 655 aa19.58■□□□□ 0.72
CHFR-209ENST00000535181 CROTQ9UKG9 612 aa19.58■□□□□ 0.72
CHFR-209ENST00000535181 PCDHGA6Q9Y5G7 932 aa19.58■□□□□ 0.72
CHFR-209ENST00000535181 USP24Q9UPU5 2620 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 LRRC14BA6NHZ5 514 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 DLX3O60479 287 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 RAB40ALP0C0E4 278 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 LIFP15018 202 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 H2AFXP16104 143 aaPredicted RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 CD22P20273 847 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 PRKAA2P54646 552 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 DCDP81605 110 aaKnown RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 NDUFA9Q16795 377 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 LIPJQ5W064 366 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 TMEM214Q6NUQ4 689 aaKnown RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 ZYG11AQ6WRX3 759 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 ZNF483Q8TF39 744 aaPredicted RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 CT55Q8WUE5 264 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 UBE2E3Q969T4 207 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 SMC6Q96SB8 1091 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 GPR87Q9BY21 358 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 CHST8Q9H2A9 424 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 IPPKQ9H8X2 491 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 AKIRIN1Q9H9L7 192 aaPredicted RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 GPN2Q9H9Y4 310 aaPredicted RBP19.57■□□□□ 0.72
CHFR-209ENST00000535181 MID2Q9UJV3 735 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 PLLPQ9Y342 182 aa19.57■□□□□ 0.72
CHFR-209ENST00000535181 G3V2L1 256 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 MED26O95402 600 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 PIM1P11309 404 aaPredicted RBP19.56■□□□□ 0.72
CHFR-209ENST00000535181 TCN2P20062 427 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 ITGAXP20702 1163 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 ITPKBP27987 946 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 DLSTP36957 453 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 HNF4AP41235 474 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 DNASE1L3Q13609 305 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 CASP8Q14790 479 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 HIST2H2ACQ16777 129 aaPredicted RBP19.56■□□□□ 0.72
CHFR-209ENST00000535181 NKAIN1Q4KMZ8 207 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 ZNF678Q5SXM1 525 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 HIST2H2AA3Q6FI13 130 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 GRHL2Q6ISB3 625 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 FAM198BQ6UWH4 519 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 VASH2Q86V25 355 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 CREB3L4Q8TEY5 395 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 FKBP10Q96AY3 582 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 L3HYPDHQ96EM0 354 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 SLC45A3Q96JT2 553 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 NTMT1Q9BV86 223 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 IQCGQ9H095 443 aaKnown RBP19.56■□□□□ 0.72
CHFR-209ENST00000535181 RHBGQ9H310 441 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 SSU72Q9NP77 194 aaKnown RBP19.56■□□□□ 0.72
CHFR-209ENST00000535181 CDC14AQ9UNH5 594 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 TSC22D4Q9Y3Q8 395 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 ACTL7BQ9Y614 415 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 SLC22A7Q9Y694 548 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 CFAP47Q6ZTR5 3102 aa19.56■□□□□ 0.72
CHFR-209ENST00000535181 C9J4A7 227 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 NDUFS4O43181 175 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 RECKO95980 971 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 CAPN1P07384 714 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 SERPINA6P08185 405 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 CD63P08962 238 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 MYL2P10916 166 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 IMPDH1P20839 514 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 ALAS2P22557 587 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 SERPINB1P30740 379 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 TMPRSS3P57727 454 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 NAA20P61599 178 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 RGS1Q08116 209 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 RBBP5Q15291 538 aaKnown RBP19.55■□□□□ 0.72
CHFR-209ENST00000535181 C1orf189Q5VU69 101 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 LCN10Q6JVE6 187 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 FAM199XQ6PEV8 388 aaPredicted RBP19.55■□□□□ 0.72
CHFR-209ENST00000535181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHFR-209ENST00000535181 LAS2Q8IYD9 372 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 L3MBTL4Q8NA19 623 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 SNRNP27Q8WVK2 155 aaKnown RBP19.55■□□□□ 0.72
CHFR-209ENST00000535181 TMEM237Q96Q45 408 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 SLC6A16Q9GZN6 736 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 DRC3Q9H069 523 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 ZBTB26Q9HCK0 441 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 ZNF490Q9ULM2 529 aaPredicted RBP19.55■□□□□ 0.72
CHFR-209ENST00000535181 ZZEF1O43149 2961 aa19.55■□□□□ 0.72
CHFR-209ENST00000535181 OR7A17O14581 309 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 PRPF4O43172 522 aaKnown RBP eCLIP19.54■□□□□ 0.726e-6■■■■□ 20.1
CHFR-209ENST00000535181 EFSO43281 561 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 TYROBPO43914 113 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 CLEC3AO75596 197 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 ALBP02768 609 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 DNAJB13P59910 316 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 NCF4Q15080 339 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 CRTC2Q53ET0 693 aaPredicted RBP19.54■□□□□ 0.72
CHFR-209ENST00000535181 NIPAL1Q6NVV3 410 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 MED27Q6P2C8 311 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 AFAP1L2Q8N4X5 818 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 MAGEB10Q96LZ2 347 aaPredicted RBP19.54■□□□□ 0.72
CHFR-209ENST00000535181 STMN4Q9H169 189 aaPredicted RBP19.54■□□□□ 0.72
CHFR-209ENST00000535181 SLC26A1Q9H2B4 701 aa19.54■□□□□ 0.72
CHFR-209ENST00000535181 NOL11Q9H8H0 719 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms