RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 OR6C74A6NCV1 312 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 OR5K3A6NET4 321 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 LRRC14BA6NHZ5 514 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 MATN2O00339 956 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 ZW10O43264 779 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 B4GAT1O43505 415 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 ITM2AO43736 263 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 NPHS1O60500 1241 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 BCAS2O75934 225 aaPredicted RBP11.83□□□□□ -0.52
SCARB1-204ENST00000535005 UBXN7O94888 489 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 WDR47O94967 919 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 FKBP9O95302 570 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 MYF5P13349 255 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 NPPBP16860 134 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 CKMT2P17540 419 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 SLC5A2P31639 672 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 GPLD1P80108 840 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 FBXO48Q5FWF7 155 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 TCHHL1Q5QJ38 904 aaPredicted RBP11.83□□□□□ -0.52
SCARB1-204ENST00000535005 STPG1Q5TH74 334 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 GUSBP11Q6P575 273 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 ZCCHC23Q6ZST2 131 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 OOSP2Q86WS3 158 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF761Q86XN6 746 aaPredicted RBP11.83□□□□□ -0.52
SCARB1-204ENST00000535005 NAXDQ8IW45 347 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 OR2A1Q8NGT9 310 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 PYCR2Q96C36 320 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 OR4K3Q96R72 315 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 NUF2Q9BZD4 464 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 GSTO2Q9H4Y5 243 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 HRASLS2Q9NWW9 162 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 GPRC5BQ9NZH0 403 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 EPHA6Q9UF33 1036 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 SLC22A14Q9Y267 594 aa11.83□□□□□ -0.52
SCARB1-204ENST00000535005 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
SCARB1-204ENST00000535005 IGHV1OR21-1A0A087WYE8 117 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PIPSLA2A3N6 862 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 SH3BP5O60239 455 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 SUPT7LO94864 414 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 BMP10O95393 424 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PROS1P07225 676 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 EPB42P16452 691 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 NCF2P19878 526 aaPredicted RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 ACP1P24666 158 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PEBP1P30086 187 aaKnown RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PSMD7P51665 324 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 ABATP80404 500 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 DAB2P98082 770 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 GALNT1Q10472 559 aaPredicted RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 TMED1Q13445 227 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PRAMEF13Q5VWM6 474 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 SUSD1Q6UWL2 747 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 Q6ZNX1 250 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PIP4P1Q86T03 277 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 CHERPQ8IWX8 916 aaKnown RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 C2orf73Q8N5S3 287 aaPredicted RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 CCNYL1Q8N7R7 359 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 LMNTD1Q8N9Z9 388 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 SMYD1Q8NB12 490 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 TSPAN14Q8NG11 270 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 OR10G6Q8NH81 332 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 FLVCR1-AS1Q8TAF5 88 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 MED8Q96G25 268 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 CNDP2Q96KP4 475 aaKnown RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 CDC6Q99741 560 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 DRC3Q9H069 523 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 ZBTB26Q9HCK0 441 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 SPHK1Q9NYA1 384 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 VTI1BQ9UEU0 232 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PAIP2BQ9ULR5 123 aaKnown RBP11.82□□□□□ -0.52
SCARB1-204ENST00000535005 PCDHB11Q9Y5F2 797 aa11.82□□□□□ -0.52
SCARB1-204ENST00000535005 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CPED1A4D0V7 1026 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 C2orf74A8MZ97 194 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 GDF9O60383 454 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 KATNA1O75449 491 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 LYPLA1O75608 230 aaPredicted RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 AMD1P17707 334 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 EPORP19235 508 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ME2P23368 584 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CAPZBP47756 277 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 OR1D5P58170 312 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PHEXP78562 749 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CLCQ05315 142 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PRDX1Q06830 199 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PRKAA1Q13131 559 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 E2F2Q14209 437 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CLPPQ16740 277 aaPredicted RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 SPRED1Q7Z699 444 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 RSC1A1Q92681 617 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 DUS3LQ96G46 650 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms