RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TMOD1P28289 359 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CD38P28907 300 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 UGT1A3P35503 534 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 RASSF2P50749 326 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 P2RX3P56373 397 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ZBED6P86452 979 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 DMTNQ08495 405 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 PLD1Q13393 1074 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 QRICH1Q2TAL8 776 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF284Q2VY69 593 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ALDH1L2Q3SY69 923 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CAMKMTQ7Z624 323 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 DNAJB7Q7Z6W7 309 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 PATL1Q86TB9 770 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 FAM9BQ8IZU0 186 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 AVL9Q8NBF6 648 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 SCCPDHQ8NBX0 429 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ACBD4Q8NC06 268 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 PSMG2Q969U7 264 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 OTULINQ96BN8 352 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 PGAP3Q96FM1 320 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 SIPA1Q96FS4 1042 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 GABRG3Q99928 467 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ERVMER34-1Q9H9K5 563 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CLK4Q9HAZ1 481 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CCDC177Q9NQR7 707 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 SIRT3Q9NTG7 399 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 AGPAT5Q9NUQ2 364 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ARHGEF38Q9NXL2 777 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 C5AR2Q9P296 337 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CPSF2Q9P2I0 782 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 RCOR3Q9P2K3 495 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 HEY2Q9UBP5 337 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 PLAGL1Q9UM63 463 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 EXO1Q9UQ84 846 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 LOC102723996A0A087X1L8 192 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TMEM272A0A1B0GTI8 110 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 LOC101059948A0A1B0GTJ6 334 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 AKR1B15C9JRZ8 316 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 J3KR12 359 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TLR4O00206 839 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 E2F3O00716 465 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DPM1O60762 260 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DAB1O75553 588 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 APOA4P06727 396 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 POLR2MP0CAP2 368 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 GIMD1P0DJR0 217 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 MMP9P14780 707 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 MAOAP21397 527 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DGKAP23743 735 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 CDC25CP30307 473 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 NMT1P30419 496 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 ADORA2A-AS1P86434 159 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TSPY1Q01534 308 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 PRPF4BQ13523 1007 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 MYBPC2Q14324 1141 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DLG2Q15700 870 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DEFB113Q30KQ7 82 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 WASHC2DQ5SRD0 308 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 ERMARDQ5T6L9 678 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 ATF7IP2Q5U623 682 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 KRT79Q5XKE5 535 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 LINGO4Q6UY18 593 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 HIPK1Q86Z02 1210 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 HACE1Q8IYU2 909 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 SPATA6LQ8N4H0 392 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 LRRC17Q8N6Y2 441 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 POGLUT1Q8NBL1 392 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 OR8K5Q8NH50 307 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TRPC4APQ8TEL6 797 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 KIAA1143Q96AT1 154 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 HARBI1Q96MB7 349 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 GFM1Q96RP9 751 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TRMOQ9BU70 441 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 SLC25A23Q9BV35 468 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 KIFC3Q9BVG8 833 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 FN3KRPQ9HA64 309 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 MRPL40Q9NQ50 206 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 SH3GLB2Q9NR46 395 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 DECR2Q9NUI1 292 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 CWC15Q9P013 229 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 NTNG1Q9Y2I2 539 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 MYH6P13533 1939 aa4.31□□□□□ -1.72
ECHDC1-223ENST00000534442 TDRD6O60522 2096 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 CKAP5Q14008 2032 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 hCG_1809904A0A1W2PP81 198 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 A0A1W2PPE2 198 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 A0A1W2PR64 198 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 LRRC72A6NJI9 287 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 WASH3PC4AMC7 463 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 CCER2I3L3R5 266 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 MAGEB2O15479 319 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 AKAP8O43823 692 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 RANBP6O60518 1105 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms