RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SLFN11Q7Z7L1 901 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM73Q86UV7 250 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ZBTB46Q86UZ6 589 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CDC20BQ86Y33 519 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TMTC1Q8IUR5 882 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CREBRFQ8IUR6 639 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 METTL27Q8N6F8 245 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 LMNTD1Q8N9Z9 388 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 AVL9Q8NBF6 648 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 GPR26Q8NDV2 337 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ACRBPQ8NEB7 543 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 OR2Y1Q8NGV0 311 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 BRIX1Q8TDN6 353 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC20A1Q8WUM9 679 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CENPIQ92674 756 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 Q96MF0 132 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF396Q96N95 335 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MCCC1Q96RQ3 725 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DMRTA2Q96SC8 542 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ALOXE3Q9BYJ1 711 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC7A5P2Q9GIP4 190 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 REXO4Q9GZR2 422 aaKnown RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 LHPPQ9H008 270 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 PDCL3Q9H2J4 239 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 GOLPH3LQ9H4A5 285 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CLSTN2Q9H4D0 955 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 XKR8Q9H6D3 395 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 GRPEL1Q9HAV7 217 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ETNK2Q9NVF9 386 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ANKRD10Q9NXR5 420 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 ABI3Q9P2A4 366 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 IFT80Q9P2H3 777 aaPredicted RBP2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 SERTAD3Q9UJW9 196 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 DNAJC12Q9UKB3 198 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRHDEQ9UKU6 1024 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 FZD10Q9ULW2 581 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 RNF6Q9Y252 685 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CHKBQ9Y259 395 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL20Q9Y2M5 609 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 MRFAP1Q9Y605 127 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 HS3ST3B1Q9Y662 390 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 LRP4O75096 1905 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 CHD5Q8TDI0 1954 aa2.83□□□□□ -1.96
CHMP4A-208ENST00000534106 TRRAPQ9Y4A5 3859 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NYNRINQ9P2P1 1898 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 FER1L5A0AVI2 2057 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TRAV17A0A0B4J275 112 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A0J9YYE9 177 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 C17orf113A0A1B0GUU1 675 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ARHGAP42A6NI28 874 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 C2CD4BA6NLJ0 364 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 C9J4A7 227 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 E7EQ34 232 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 H3BMH7 237 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PSMD11O00231 422 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CHUKO15111 745 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PMM2O15305 246 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CCP110O43303 1012 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A9O60656 530 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ITGA10O75578 1167 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 POP7O75817 140 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MTA2O94776 668 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PRKD3O94806 890 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SNUPNO95149 360 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC25A14O95258 325 aaPredicted RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 YEATS4O95619 227 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 TRBC1P01850 177 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CRYABP02511 175 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC4A1P02730 911 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 POLBP06746 335 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 LTA4HP09960 611 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PIRTP0C851 137 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC2A4P14672 509 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CYP11B1P15538 503 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF30P17039 623 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CHRNB2P17787 502 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 ERCC2P18074 760 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A6P19224 532 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PTMSP20962 102 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT1A1P22309 533 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CMA1P23946 247 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 MMP11P24347 488 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PRDX3P30048 256 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SDC4P31431 198 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 PTGER1P34995 402 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 OR1D4P47884 311 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SPINT3P49223 89 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CLCNKAP51800 687 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CHN2P52757 468 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CTSCP53634 463 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 CASP6P55212 293 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 AP1S1P61966 158 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 KRT85P78386 507 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NKX6-1P78426 367 aaPredicted RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 DSC2Q02487 901 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 RBPJQ06330 500 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 RUNX1T1Q06455 604 aa2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 SRSF4Q08170 494 aaKnown RBP2.82□□□□□ -1.96
CHMP4A-208ENST00000534106 NIPAL4Q0D2K0 466 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms