RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 C9orf43Q8TAL5 461 aaPredicted RBP2.24□□□□□ -2.05
BRCA2-205ENST00000533776 METTL21AQ8WXB1 218 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 VPS33AQ96AX1 596 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 RMDN1Q96DB5 314 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 FAM218AQ96MZ4 157 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 PSMB7Q99436 277 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 FAM129AQ9BZQ8 928 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 MTMR12Q9C0I1 747 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 XAB2Q9HCS7 855 aaKnown RBP2.24□□□□□ -2.05
BRCA2-205ENST00000533776 GSN-AS1Q9NRJ2 163 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.24□□□□□ -2.05
BRCA2-205ENST00000533776 GTSE1Q9NYZ3 720 aa2.24□□□□□ -2.05
BRCA2-205ENST00000533776 TRAV24A0A0B4J272 114 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TRBV4-1A0A0J9YWV2 114 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ZNF840PA6NDX5 716 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 O00370 1275 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TEX28O15482 410 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 BAG3O95817 575 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 GP1BBP13224 206 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ERCC2P18074 760 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 HLCSP50747 726 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 LIMK1P53667 647 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 MZT1Q08AG7 82 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TRIM29Q14134 588 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TAB1Q15750 504 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 MS4A18Q3C1V0 323 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 LACTB2Q53H82 288 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 KRBOX4Q5JUW0 171 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 FHL5Q5TD97 284 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TMED8Q6PL24 325 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 IL17RELQ6ZVW7 336 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 OR4N5Q8IXE1 308 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 MAML2Q8IZL2 1156 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 OR8H2Q8N162 312 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 CD177Q8N6Q3 437 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 CCDC89Q8N998 374 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 CAMKVQ8NCB2 501 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 RHOXF1Q8NHV9 184 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 PIK3R3Q92569 461 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TSACCQ96A04 125 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 C2orf48Q96LS8 159 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 CFAP57Q96MR6 1250 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ZIM3Q96PE6 472 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 GTPBP2Q9BX10 602 aaKnown RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 SLITRK2Q9H156 845 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ADNPQ9H2P0 1102 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 PARLQ9H300 379 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 FZD8Q9H461 694 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ST6GALNAC4Q9H4F1 302 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 RABEP2Q9H5N1 569 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TNFRSF19Q9NS68 423 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 SWAP70Q9UH65 585 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TSPAN16Q9UKR8 245 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 POMT2Q9UKY4 750 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 ZNF256Q9Y2P7 627 aaPredicted RBP2.23□□□□□ -2.05
BRCA2-205ENST00000533776 TTLL3Q9Y4R7 772 aa2.23□□□□□ -2.05
BRCA2-205ENST00000533776 IGSF1Q8N6C5 1336 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 A0A087WWV3 80 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 A8MXE2 369 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 HMGB1P1B2RPK0 211 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 G3V2L1 256 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 ZNF354AO60765 605 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 TBX10O75333 385 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 CEACAM4O75871 244 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 PENKP01210 267 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 SERPING1P05155 500 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 FYNP06241 537 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 EEF1DP29692 281 aaKnown RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 CETN2P41208 172 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 CLDN15P56746 228 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 NDPQ00604 133 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 DHODHQ02127 395 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 ILF2Q12905 390 aaKnown RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 ZNF177Q13360 481 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 COG2Q14746 738 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 OPCMLQ14982 345 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 PTPN14Q15678 1187 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 C3AR1Q16581 482 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 OR4C11Q6IEV9 310 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 PPP1R21Q6ZMI0 780 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 SLC24A5Q71RS6 500 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 KRT74Q7RTS7 529 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 FAM219AQ8IW50 185 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 LRTM2Q8N967 370 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 CCDC191Q8NCU4 936 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 OR5T2Q8NGG2 359 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 EXT2Q93063 718 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 CNDP2Q96KP4 475 aaKnown RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 SPATA33Q96N06 139 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 LRRC3BQ96PB8 259 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 KLHL5Q96PQ7 755 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 UBAC1Q9BSL1 405 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 NAA11Q9BSU3 229 aaPredicted RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 KATNB1Q9BVA0 655 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 POLLQ9UGP5 575 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 LNPEPQ9UIQ6 1025 aa2.22□□□□□ -2.05
BRCA2-205ENST00000533776 PA2G4Q9UQ80 394 aaKnown RBP2.22□□□□□ -2.05
BRCA2-205ENST00000533776 FER1L5A0AVI2 2057 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms