RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 KIAA1161Q6NSJ0 714 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 C17orf64Q86WR6 236 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 VPS37AQ8NEZ2 397 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 PHF12Q96QT6 1004 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 CLDND1Q9NY35 253 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 SMPD3Q9NY59 655 aaPredicted RBP27.33■■□□□ 1.97
SAMD1-202ENST00000533683 PCDHB11Q9Y5F2 797 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 A0A1B0GTW7 788 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 A0A1W2PQF6 199 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 LATO43561 262 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 RNGTTO60942 597 aaKnown RBP27.33■■□□□ 1.97
SAMD1-202ENST00000533683 KLHL18O94889 574 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 KCNK5O95279 499 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 CLPTM1O96005 669 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 CTHP32929 405 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 HSD17B2P37059 387 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 ANXA8L1Q5VT79 327 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 KRT78Q8N1N4 520 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 METTL4Q8N3J2 472 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 FAM47BQ8NA70 645 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 OSGEPL1Q9H4B0 414 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 REEP4Q9H6H4 257 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 PNPLA3Q9NST1 481 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 ATP6V1HQ9UI12 483 aa27.33■■□□□ 1.97
SAMD1-202ENST00000533683 EGFP01133 1207 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 TFAP2AP05549 437 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 COL9A1P20849 921 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 ADPRHP54922 357 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 ZNF385BQ569K4 471 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 OTUD3Q5T2D3 398 aaPredicted RBP27.32■■□□□ 1.96
SAMD1-202ENST00000533683 CXorf40BQ96DE9 158 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 MRPS26Q9BYN8 205 aaKnown RBP27.32■■□□□ 1.96
SAMD1-202ENST00000533683 TPT1P8Q9HAU6 139 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 DNAJB9Q9UBS3 223 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 CST1P01037 141 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 CEACAM5P06731 702 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 IL1RNP18510 177 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 IGFALSP35858 605 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 PHEXP78562 749 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 ZZZ3Q8IYH5 903 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 PNPT1Q8TCS8 783 aaKnown RBP27.32■■□□□ 1.96
SAMD1-202ENST00000533683 INSM2Q96T92 566 aaPredicted RBP27.32■■□□□ 1.96
SAMD1-202ENST00000533683 MAGIXQ9H6Y5 334 aa27.32■■□□□ 1.96
SAMD1-202ENST00000533683 MYF6P23409 242 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 PTX3P26022 381 aaPredicted RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 MAT2AP31153 395 aaKnown RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 RBBP5Q15291 538 aaKnown RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 C16orf78Q8WTQ4 265 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 CYGBQ8WWM9 190 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 CUEDC1Q9NWM3 386 aaPredicted RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 KCNK6Q9Y257 313 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 MAGED1Q9Y5V3 778 aaPredicted RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 C1orf226A1L170 272 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 CCNDBP1O95273 360 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 H6PDO95479 791 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 KLF8O95600 359 aaPredicted RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 KLK1P06870 262 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 HOXB2P14652 356 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 ATP6V1B1P15313 513 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 PSMB5P28074 263 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 LTBRP36941 435 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 MC1RQ01726 317 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 APOFQ13790 326 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 MLF2Q15773 248 aaPredicted RBP27.31■■□□□ 1.96
SAMD1-202ENST00000533683 VMACQ2NL98 169 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 CYBRD1Q53TN4 286 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 SATL1Q86VE3 508 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 PTOV1Q86YD1 416 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 OR10Q1Q8NGQ4 319 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 SMPDL3AQ92484 453 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 PYURFQ96I23 114 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 C12orf66Q96MD2 445 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 FZD3Q9NPG1 666 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 SPATA7Q9P0W8 599 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 SLC17A4Q9Y2C5 497 aa27.31■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3DA0A087WVF3 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3IA0A087WXS9 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3EA0A087X179 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3KA0A087X1G2 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 A0A1W2PPV9 198 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3FA6NER0 549 aaPredicted RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3LB9A6J9 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 ANHXE9PGG2 379 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 RNASET2O00584 256 aaKnown RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 SNAP29O95721 258 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3HP0C7X1 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 PABPC4LP0CB38 370 aaKnown RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 ADRM1Q16186 407 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 CPZQ66K79 652 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3GQ6DHY5 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3CQ6IPX1 549 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 HORMAD1Q86X24 394 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TBC1D3Q8IZP1 549 aaPredicted RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 FERD3LQ96RJ6 166 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 DPH2Q9BQC3 489 aaPredicted RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 TIMM29Q9BSF4 260 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 BHLHE41Q9C0J9 482 aaPredicted RBP27.3■■□□□ 1.96
SAMD1-202ENST00000533683 BTBD1Q9H0C5 482 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 PELI2Q9HAT8 420 aa27.3■■□□□ 1.96
SAMD1-202ENST00000533683 PLEKHM1Q9Y4G2 1056 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms