RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 GPATCH11Q8N954 259 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 KCT2Q8NC54 265 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 ARL15Q9NXU5 204 aa16.84■□□□□ 0.29
PCF11-206ENST00000533018 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
PCF11-206ENST00000533018 RDH16O75452 317 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 RASAL1O95294 804 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 AHSGP02765 367 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 GABRB3P28472 473 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 IL2P60568 153 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 TIAL1Q01085 375 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCF11-206ENST00000533018 INAQ16352 499 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 PHKG1Q16816 387 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 HP1BP3Q5SSJ5 553 aaPredicted RBP16.83■□□□□ 0.28
PCF11-206ENST00000533018 C1QL3Q5VWW1 255 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 GFRALQ6UXV0 394 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 SHISA5Q8N114 240 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 NR4A3Q92570 626 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 PYCR2Q96C36 320 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 CERS2Q96G23 380 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 IMMP1LQ96LU5 166 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 NAT9Q9BTE0 207 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 RBCK1Q9BYM8 510 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 DDX47Q9H0S4 455 aaKnown RBP16.83■□□□□ 0.28
PCF11-206ENST00000533018 SNX12Q9UMY4 172 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 NAALAD2Q9Y3Q0 740 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 LRBAP50851 2863 aa16.83■□□□□ 0.28
PCF11-206ENST00000533018 A0A1B0GUH1 482 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 OR5H15A6NDH6 313 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 ZSCAN12O43309 604 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 ZG16O60844 167 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 CDC123O75794 336 aaPredicted RBP16.82■□□□□ 0.28
PCF11-206ENST00000533018 SERPIND1P05546 499 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 NPPBP16860 134 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 MEF2AQ02078 507 aaPredicted RBP16.82■□□□□ 0.28
PCF11-206ENST00000533018 SRSF11Q05519 484 aaKnown RBP16.82■□□□□ 0.28
PCF11-206ENST00000533018 ACTN3Q08043 901 aaPredicted RBP16.82■□□□□ 0.28
PCF11-206ENST00000533018 MSS51Q4VC12 460 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 FCRLBQ6BAA4 426 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 LCTLQ6UWM7 567 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 MFSD9Q8NBP5 474 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 TM4SF19Q96DZ7 209 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 SNF8Q96H20 258 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 PEX11GQ96HA9 241 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 KCNK13Q9HB14 408 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 SLC17A6Q9P2U8 582 aa16.82■□□□□ 0.28
PCF11-206ENST00000533018 ZNF860A6NHJ4 632 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 NDUFS4O43181 175 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 OR1F1O43749 312 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 PRAMEF2O60811 474 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 GUCA1CO95843 209 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 CRYABP02511 175 aaKnown RBP16.81■□□□□ 0.28
PCF11-206ENST00000533018 STSP08842 583 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 AGTR2P50052 363 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 CCR8P51685 355 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 PGGT1BP53609 377 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
PCF11-206ENST00000533018 NSDHLQ15738 373 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 ZNF324BQ6AW86 544 aaPredicted RBP16.81■□□□□ 0.28
PCF11-206ENST00000533018 ANKRD37Q7Z713 158 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 IGDCC3Q8IVU1 814 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 TBC1D19Q8N5T2 526 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 SGPP1Q9BX95 441 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 RNF32Q9H0A6 362 aa16.81■□□□□ 0.28
PCF11-206ENST00000533018 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
PCF11-206ENST00000533018 TRGV8A0A0C4DH27 118 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 CES2O00748 559 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 UNC5CO95185 931 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 CYC1P08574 325 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 SAT1P21673 171 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ELK3P41970 407 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ABRAXAS2Q15018 415 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 HERC3Q15034 1050 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ACER2Q5QJU3 275 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 TEDDM1Q5T9Z0 273 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 DUPD1Q68J44 220 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 PLAG1Q6DJT9 500 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 TMEM207Q6UWW9 146 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 CNTN4Q8IWV2 1026 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ATL1Q8WXF7 558 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ZNF354BQ96LW1 612 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 ABI3Q9P2A4 366 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 SEC14L3Q9UDX4 400 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 CHMP2BQ9UQN3 213 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 VWA7Q9Y334 891 aa16.8■□□□□ 0.28
PCF11-206ENST00000533018 TSPAN12O95859 305 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 ST13P50502 369 aaKnown RBP16.79■□□□□ 0.28
PCF11-206ENST00000533018 TDGF1P3P51864 188 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 AP1S2P56377 157 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 CSHL1Q14406 222 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 EXT1Q16394 746 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms