RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
COL16A1-217ENST00000532877 PILRAQ9UKJ1 303 aa13.69□□□□□ -0.22
COL16A1-217ENST00000532877 BTRCQ9Y297 605 aa13.69□□□□□ -0.22
COL16A1-217ENST00000532877 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
COL16A1-217ENST00000532877 PCDHGA4Q9Y5G9 962 aa13.69□□□□□ -0.22
COL16A1-217ENST00000532877 A0A0J9YVX5 310 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 GMNCA6NCL1 334 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 PIP5K1BO14986 540 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 LCMT2O60294 686 aaKnown RBP13.68□□□□□ -0.22
COL16A1-217ENST00000532877 CHEK2O96017 543 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 PDYNP01213 254 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 JUNP05412 331 aaKnown RBP13.68□□□□□ -0.22
COL16A1-217ENST00000532877 HK2P52789 917 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 CYP4F2P78329 520 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 E2F1Q01094 437 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 INSM1Q01101 510 aaPredicted RBP13.68□□□□□ -0.22
COL16A1-217ENST00000532877 DDX39BQ13838 428 aaKnown RBP13.68□□□□□ -0.22
COL16A1-217ENST00000532877 ABRAXAS2Q15018 415 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 DEFB110Q30KQ9 67 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 SGO1Q5FBB7 561 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 CGB2Q6NT52 195 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 RBM44Q6ZP01 1051 aaKnown RBP13.68□□□□□ -0.22
COL16A1-217ENST00000532877 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 VN1R5Q7Z5H4 357 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 B3GNT8Q7Z7M8 397 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 KMT5CQ86Y97 462 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 MFSD9Q8NBP5 474 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 RCBTB1Q8NDN9 531 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 HUS1BQ8NHY5 278 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 SELENOMQ8WWX9 145 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 USP7Q93009 1102 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 FAR2Q96K12 515 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 HBEGFQ99075 208 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 RHBGQ9H310 441 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 TUBB1Q9H4B7 451 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 PDE7BQ9NP56 450 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 TSC22D4Q9Y3Q8 395 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 PTGDR2Q9Y5Y4 395 aa13.68□□□□□ -0.22
COL16A1-217ENST00000532877 SPAARA0A1B0GVQ0 90 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 HDAC3O15379 428 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 HCRTR1O43613 425 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ULK1O75385 1050 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 DKK1O94907 266 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 TGDSO95455 350 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ALOX15P16050 662 aaPredicted RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 NELFEP18615 380 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 DRD4P21917 467 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 GSTM2P28161 218 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 SERPINB1P30740 379 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 AHRP35869 848 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ARL4DP49703 201 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 NEK2P51955 445 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 HSD11B2P80365 405 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 BTKQ06187 659 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ZFP36L1Q07352 338 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 KCNAB1Q14722 419 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 PHF19Q5T6S3 580 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 FRMPD2BQ6IN97 320 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 FBXO42Q6P3S6 717 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 RNF165Q6ZSG1 346 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 MAVSQ7Z434 540 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 VN1R4Q7Z5H5 301 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 SLCO6A1Q86UG4 719 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 WDR75Q8IWA0 830 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 DDIASQ8IXT1 998 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 D2HGDHQ8N465 521 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 TTLQ8NG68 377 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ZNF473Q8WTR7 871 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 THAP11Q96EK4 314 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 C19orf60Q96EN9 201 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 SEC16BQ96JE7 1060 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 OR2A5Q96R48 311 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 MTERF1Q99551 399 aaKnown RBP13.67□□□□□ -0.22
COL16A1-217ENST00000532877 NUF2Q9BZD4 464 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 NPHS2Q9NP85 383 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 VTI1BQ9UEU0 232 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 ZFP69BQ9UJL9 534 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 PTPRBP23467 1997 aa13.67□□□□□ -0.22
COL16A1-217ENST00000532877 LOC105369274A0A096LPK9 316 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 LOC102723532A0A0G2JNH3 316 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 ANKDD1BA6NHY2 528 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 MAGEB17A8MXT2 336 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 ZNF195O14628 629 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 MAP3K7O43318 606 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 STATHP02808 62 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 FTH1P19P0C7X4 201 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 LINC00032P0C843 101 aa13.66□□□□□ -0.22
COL16A1-217ENST00000532877 TROVE2P10155 538 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL16A1-217ENST00000532877 PIK3CBP42338 1070 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms