RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CILP2Q8IUL8 1156 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 IL21RQ9HBE5 538 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 C2orf74A8MZ97 194 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PSMD9O00233 223 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PCDHGA12O60330 932 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PER3P56645 1201 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 RPS13P62277 151 aaKnown RBP14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PTCHD3Q3KNS1 767 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 OR4F3Q6IEY1 312 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 TAS1R1Q7RTX1 841 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 GALNTL5Q7Z4T8 443 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PDPRQ8NCN5 879 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 PIK3R3Q92569 461 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 KCNJ9Q92806 393 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 BORCS5Q969J3 196 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 MRM3Q9HC36 420 aaKnown RBP14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 MGAT4AQ9UM21 535 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 TNFAIP8L3Q5GJ75 292 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF676Q8N7Q3 588 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 ASPNQ9BXN1 380 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF717Q9BY31 904 aaPredicted RBP14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 FAM120CQ9NX05 1096 aaKnown RBP14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 MS4A12Q9NXJ0 267 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF487B1APH4 448 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 NPIPA5E9PKD4 350 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 NPC1O15118 1278 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 GRIA2P42262 883 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 MC1RQ01726 317 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 CCDC36Q8IYA8 594 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 CLIP4Q8N3C7 705 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 SMARCD2Q92925 531 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 TSACCQ96A04 125 aaPredicted RBP14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 CEP295NLQ96MC4 621 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 ABCB9Q9NP78 766 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 NPIPA1Q9UND3 350 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 AIREO43918 545 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 GSRP00390 522 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 CDH1P12830 882 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 GP1BBP13224 206 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 DGKQP52824 942 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 IQCCQ4KMZ1 466 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 C1orf220Q5T0J3 134 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 TXNDC5Q8NBS9 432 aaKnown RBP14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 OR10G2Q8NGC3 310 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 TPSD1Q9BZJ3 242 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 OR51B5Q9H339 312 aa14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
PCDHA9-202ENST00000532602 GLOD5A6NK44 160 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 PTNP21246 168 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 SUOXP51687 545 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 DHCR24Q15392 516 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 NANOGNBQ7Z5D8 188 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 CPNE2Q96FN4 548 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 MANBAO00462 879 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ABLIM1O14639 778 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TRAPPC6AO75865 159 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC6A9P48067 706 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 DUOXA1Q1HG43 343 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 CST9Q5W186 159 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TNFAIP8L1Q8WVP5 186 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 KCNH6Q9H252 994 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 PEX16Q9Y5Y5 336 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 BACE2Q9Y5Z0 518 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TEX264Q9Y6I9 313 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ITGB4P16144 1822 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 DDX60Q8IY21 1712 aaKnown RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 IGLON5A6NGN9 336 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 RNGTTO60942 597 aaKnown RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 OXTRP30559 389 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF41P51814 821 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 CD47Q08722 323 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 PROKR2Q8NFJ6 384 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TBC1D17Q9HA65 648 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 HRASLS2Q9NWW9 162 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 H1F0P07305 194 aaKnown RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 HSD11B1P28845 292 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC2A13Q96QE2 648 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 GPR22Q99680 433 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 MYH8P13535 1937 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TP53I11O14683 189 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ITGA10O75578 1167 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 CDC123O75794 336 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 LATS1O95835 1130 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 OPN1SWP03999 348 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 LINGO3P0C6S8 592 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ENGP17813 658 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 MAP3K8P41279 467 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 SCN1BQ07699 218 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ELAVL3Q14576 367 aaKnown RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF630Q2M218 657 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 CYP27C1Q4G0S4 372 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 C1orf216Q8TAB5 229 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 KIAA1191Q96A73 305 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 FCRL3Q96P31 734 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 ZIC5Q96T25 663 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms