RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GTPBP3Q969Y2 492 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 FIZ1Q96SL8 496 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 DERL2Q9GZP9 239 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ACTL8Q9H568 366 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SLC35C2Q9NQQ7 365 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 PAK6Q9NQU5 681 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 CD38P28907 300 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MPP7Q5T2T1 576 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 APOOQ9BUR5 198 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MTG2Q9H4K7 406 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF358Q9NW07 568 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 IQCMA0A1B0GVH7 501 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 AHSGP02765 367 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 PROS1P07225 676 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SLCO6A1Q86UG4 719 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ZC3HC1Q86WB0 502 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 DGCR14Q96DF8 476 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 YIPF4Q9BSR8 244 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 RAP2AP10114 183 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 DNAJB1P25685 340 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 AFF1P51825 1210 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 FAM131AQ6UXB0 335 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 LRRC17Q8N6Y2 441 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 KAT2AQ92830 837 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF570Q96NI8 536 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 DENND2DQ9H6A0 471 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 PREBQ9HCU5 417 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MS4A12Q9NXJ0 267 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 TOGARAM1Q9Y4F4 1720 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 CXorf49A8MYA2 514 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SLC30A4O14863 429 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 PCDHGA12O60330 932 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SPINT3P49223 89 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF41P51814 821 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 HERC3Q15034 1050 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 FRRS1Q6ZNA5 592 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SLC25A36Q96CQ1 311 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MKKSQ9NPJ1 570 aaPredicted RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 B3GAT2Q9NPZ5 323 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 SPATA7Q9P0W8 599 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 NRAPQ86VF7 1730 aa10.94□□□□□ -0.66
PTPRK-221ENST00000532331 DDX60Q8IY21 1712 aaKnown RBP10.94□□□□□ -0.66
PTPRK-221ENST00000532331 MYO9BQ13459 2157 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 SIX3O95343 332 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 LYNP07948 512 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MPC1LP0DKB6 136 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MYCLP1P12525 358 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 OR4D2P58180 307 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 SCARB2Q14108 478 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 GPR68Q15743 365 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 AHSA2Q719I0 299 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF433Q8N7K0 673 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 EFHD2Q96C19 240 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 SMURF2Q9HAU4 748 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MOCS1Q9NZB8 636 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ATXN10Q9UBB4 475 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MAN2B2Q9Y2E5 1009 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 LCHNA4D1U4 455 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 LOC110117498-PIK3R3F6TDL0 507 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ATF6P18850 670 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MGAT3Q09327 533 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF267Q14586 743 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 DUSP6Q16828 381 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 NAT6Q93015 286 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CAMK1GQ96NX5 476 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CADM1Q9BY67 442 aaKnown RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 RBCK1Q9BYM8 510 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 DNAJB9Q9UBS3 223 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ARHGEF33A8MVX0 844 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 LOC730098B7Z3J9 87 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 BTN3A3O00478 584 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 SLC16A5O15375 505 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 C9P02748 559 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 DNASE1L1P49184 302 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 HMGCS1Q01581 520 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 PIGWQ7Z7B1 504 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CSNK1A1LQ8N752 337 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF222Q9UK12 451 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 TBX21Q9UL17 535 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 TPST2O60704 377 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 FOXN2P32314 431 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 SDC2P34741 201 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 IRS1P35568 1242 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 PIK3CBP42338 1070 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CLCN4P51793 760 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 RPS13P62277 151 aaKnown RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CLDN10P78369 228 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 RBM20Q5T481 1227 aaKnown RBP10.93□□□□□ -0.66
PTPRK-221ENST00000532331 KIAA0319Q5VV43 1072 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 KIAA0895LQ68EN5 471 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms