RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 UNC13CQ8NB66 2214 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 TXNDC9O14530 226 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 UBFD1O14562 309 aaKnown RBP11.97□□□□□ -0.49
COPB1-208ENST00000532088 CASC3O15234 703 aaKnown RBP11.97□□□□□ -0.49
COPB1-208ENST00000532088 HGFP14210 728 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 PVRP15151 417 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 CD22P20273 847 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 CSTF2P33240 577 aaKnown RBP eCLIP11.97□□□□□ -0.49
COPB1-208ENST00000532088 GABRA4P48169 554 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 SLC1A6P48664 564 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 ARL4DP49703 201 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 HK2P52789 917 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 ERVPABLB-1P60509 514 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 YBX1P67809 324 aaKnown RBP11.97□□□□□ -0.49
COPB1-208ENST00000532088 BST1Q10588 318 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 SLBPQ14493 270 aaKnown RBP eCLIP11.97□□□□□ -0.49
COPB1-208ENST00000532088 PHF19Q5T6S3 580 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 HES3Q5TGS1 186 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 LETMD1Q6P1Q0 360 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 MED27Q6P2C8 311 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 FBXO42Q6P3S6 717 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 TMIGD1Q6UXZ0 262 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 ZCCHC23Q6ZST2 131 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 ADCK2Q7Z695 626 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 CUZD1Q86UP6 607 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 LSMEM2Q8N112 164 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 MFSD9Q8NBP5 474 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 TRPV3Q8NET8 790 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 PPM1MQ96MI6 270 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 C7orf26Q96N11 449 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 OR2A5Q96R48 311 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 CMKLR1Q99788 373 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 FANCEQ9HB96 536 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 MID1IP1Q9NPA3 183 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 SOHLH2Q9NX45 425 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
COPB1-208ENST00000532088 KLHL3Q9UH77 587 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 ZNF225Q9UK10 706 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 PLCL2Q9UPR0 1127 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 RAP2CQ9Y3L5 183 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 AP1M2Q9Y6Q5 423 aa11.97□□□□□ -0.49
COPB1-208ENST00000532088 PTPRZ1P23471 2315 aaPredicted RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 B4E171 279 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 PPP6CO00743 305 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 HAT1O14929 419 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 CTSVO60911 334 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 CSO75390 466 aaKnown RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 HSPA4LO95757 839 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 KRT6AP02538 564 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 KRT6BP04259 564 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 CHRNGP07510 517 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 THBS1P07996 1170 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 UROSP10746 265 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 MDH1P40925 334 aaKnown RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 TSPAN7P41732 249 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 PIK3CBP42338 1070 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 KRT6CP48668 564 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 PHEXP78562 749 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 OCRLQ01968 901 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 PWP1Q13610 501 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 TCTE1Q5JU00 501 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 RPS27LQ71UM5 84 aaKnown RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 TMPRSS7Q7RTY8 843 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 B3GNT8Q7Z7M8 397 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 SYVN1Q86TM6 617 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 CLYBLQ8N0X4 340 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 AFAP1L2Q8N4X5 818 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 ZNF655Q8N720 491 aaPredicted RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 WDR20Q8TBZ3 569 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 FAR2Q96K12 515 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 FCRL4Q96PJ5 515 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 SORT1Q99523 831 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 CCT7Q99832 543 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 B3GNT4Q9C0J1 378 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 ILKAPQ9H0C8 392 aaPredicted RBP11.96□□□□□ -0.49
COPB1-208ENST00000532088 FAM60AQ9NP50 221 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 FBXO8Q9NRD0 319 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 ZFP69BQ9UJL9 534 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 SNX6Q9UNH7 406 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
COPB1-208ENST00000532088 HEATR5BQ9P2D3 2071 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 CCDC187A0A096LP49 1063 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 A0A1B0GTL3 188 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 A0A1W2PNR3 127 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 SLCO1B7G3V0H7 640 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 FOXE1O00358 373 aaPredicted RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 AZIN1O14977 448 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 CLEC3AO75596 197 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 OR4F21O95013 312 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 HSD3B1P14060 373 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 TSPAN8P19075 237 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 MPSTP25325 297 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 HSD3B2P26439 372 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 ARRB2P32121 409 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 ARL1P40616 181 aaPredicted RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 BCL6P41182 706 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms