RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MMP12P39900 470 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 SLC6A12P48065 614 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 CLK3P49761 638 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 RPS14P62263 151 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 IRF8Q02556 426 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 TMEM115Q12893 351 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 EPS8Q12929 822 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 SLC13A2Q13183 592 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 NAE1Q13564 534 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 SF1Q15637 639 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 TTC23Q5W5X9 447 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DPPA4Q7L190 304 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PLPP6Q8IY26 295 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PHACTR4Q8IZ21 702 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 TCAIMQ8N3R3 496 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DTWD1Q8N5C7 304 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PSMA8Q8TAA3 256 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DYNC2LI1Q8TCX1 351 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GTF2H4Q92759 462 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 AURKBQ96GD4 344 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PLXNB3Q9ULL4 1909 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 ZNF106Q9H2Y7 1883 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 TCRBV5S2A0A599 114 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 ZNF99A8MXY4 864 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 K7ESM1 405 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 ARNTLO00327 626 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 WNT9AO14904 365 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 KPNA5O15131 536 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GSTA4O15217 222 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 HTR1AP08908 422 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PCNAP12004 261 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GP2P55259 537 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 CDK10Q15131 360 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 USP39Q53GS9 565 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 XKR6Q5GH73 641 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 UBE2UQ5VVX9 321 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 FKBP9P1Q75LS8 142 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 TECPR1Q7Z6L1 1165 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DSN1Q9H410 356 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 RABL2AQ9UBK7 228 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 PCDHGB1Q9Y5G3 927 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 MTCL1Q9Y4B5 1905 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 TPPPO94811 219 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 HPRP00739 348 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 HTR1EP28566 365 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 IFNA8P32881 189 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 HNMTP50135 292 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 ARSFP54793 590 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DCDC1P59894 354 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PFN3P60673 137 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GPM6BQ13491 265 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 FAM78AQ5JUQ0 283 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 C6orf141Q5SZD1 244 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 POC5Q8NA72 575 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 VN1R2Q8NFZ6 395 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 TTC9Q92623 222 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 MTERF1Q99551 399 aaKnown RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PAK1IP1Q9NWT1 392 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 PMF1-BGLAPU3KQ54 211 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 KCNE1BA0A087WTH5 132 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 MMP20O60882 483 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ATG13O75143 517 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
USP35-207ENST00000530546 THRBP10828 461 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 PCMT1P22061 227 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 PRKACBP22694 351 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 UBE3AQ05086 875 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 DPY19L1Q2PZI1 675 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ADPRMQ3LIE5 342 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 AGAP6Q5VW22 663 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 METTL2BQ6P1Q9 378 aaKnown RBP11.15□□□□□ -0.62
USP35-207ENST00000530546 GCNT7Q6ZNI0 430 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 THOC6Q86W42 341 aaKnown RBP11.15□□□□□ -0.62
USP35-207ENST00000530546 FBXO30Q8TB52 745 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 NDNFQ8TB73 568 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 GLMNQ92990 594 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ARRDC3Q96B67 414 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 AGAP4Q96P64 663 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CHID1Q9BWS9 393 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CLMPQ9H6B4 373 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 SLC6A13Q9NSD5 602 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 SLC25A37Q9NYZ2 338 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 FBXO10Q9UK96 956 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 RANBP2P49792 3224 aaKnown RBP11.15□□□□□ -0.62
USP35-207ENST00000530546 TSPAN11A1L157 253 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 E7EQ34 232 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ZFC3H1O60293 1989 aaKnown RBP11.15□□□□□ -0.62
USP35-207ENST00000530546 AP2A2O94973 939 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 FKBP9O95302 570 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 NPPAP01160 153 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms