RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PEX13Q92968 403 aa8.47□□□□□ -1.05
VPS11-203ENST00000529545 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
VPS11-203ENST00000529545 EBNA1BP2Q99848 306 aaKnown RBP8.47□□□□□ -1.05
VPS11-203ENST00000529545 TP63Q9H3D4 680 aaPredicted RBP8.47□□□□□ -1.05
VPS11-203ENST00000529545 FAM114A2Q9NRY5 505 aa8.47□□□□□ -1.05
VPS11-203ENST00000529545 SLC2A6Q9UGQ3 507 aa8.47□□□□□ -1.05
VPS11-203ENST00000529545 TAC3Q9UHF0 121 aa8.47□□□□□ -1.05
VPS11-203ENST00000529545 RUVBL2Q9Y230 463 aaKnown RBP8.47□□□□□ -1.05
VPS11-203ENST00000529545 ASB1Q9Y576 335 aa8.47□□□□□ -1.05
VPS11-203ENST00000529545 ANKHD1Q8IWZ3 2542 aaKnown RBP8.46□□□□□ -1.05
VPS11-203ENST00000529545 HCFC1P51610 2035 aa8.46□□□□□ -1.05
VPS11-203ENST00000529545 A0A1B0GTH9 108 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 SYCE3A1L190 88 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 KRT87PA6NCN2 255 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 NKX2-6A6NCS4 301 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 KLRC4-KLRK1H3BQV0 150 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 PFDN6O15212 129 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 CD3EAPO15446 510 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 NME2P1O60361 137 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 MFAP3LO75121 409 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 NEURL1O76050 574 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 NSA2O95478 260 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 HOXD4P09016 255 aaPredicted RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 NME2P22392 152 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 MSX1P28360 303 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 ST13P50502 369 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 NAP1L1P55209 391 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 EIF3BP55884 814 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 ABATP80404 500 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 SEMA3AQ14563 771 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 NSDHLQ15738 373 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 SFT2D3Q587I9 215 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 THEMIS2Q5TEJ8 643 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 ZNF425Q6IV72 752 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 PAPD4Q6PIY7 484 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 ACAD11Q709F0 780 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 RPS19BP1Q86WX3 136 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 CNGA4Q8IV77 575 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 MPP5Q8N3R9 675 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 CPSF7Q8N684 471 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 PPHLN1Q8NEY8 458 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 MYRIPQ8NFW9 859 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 NINJ1Q92982 152 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 PANX2Q96RD6 677 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 CDCP1Q9H5V8 836 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 ABCF3Q9NUQ8 709 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 DNAJB12Q9NXW2 375 aaKnown RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 HCN3Q9P1Z3 774 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 RNF6Q9Y252 685 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 KLF13Q9Y2Y9 288 aaPredicted RBP8.46□□□□□ -1.06
VPS11-203ENST00000529545 SPG11Q96JI7 2443 aa8.46□□□□□ -1.06
VPS11-203ENST00000529545 HEATR5BQ9P2D3 2071 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 INTS1Q8N201 2190 aaKnown RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 IGKV1-8A0A0C4DH67 115 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 H3BMM5 538 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 P2RX6O15547 441 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 CDC40O60508 579 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS11-203ENST00000529545 TOXO94900 526 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 MATN4O95460 622 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 ERGP11308 486 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 FOSL1P15407 271 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 IL10P22301 178 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 RPS3P23396 243 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS11-203ENST00000529545 ATP5DP30049 168 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 PTGER1P34995 402 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 FDFT1P37268 417 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 ANP32AP39687 249 aaKnown RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 BCL6P41182 706 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 EFNA3P52797 238 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 PNLIPRP1P54315 467 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 OR4D2P58180 307 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 ABRAXAS2Q15018 415 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 PCGF5Q86SE9 256 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 SDCCAG8Q86SQ7 713 aaPredicted RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 CHERPQ8IWX8 916 aaKnown RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 ARHGEF39Q8N4T4 335 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 ZNF778Q96MU6 729 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 NPAS2Q99743 824 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 UCK2Q9BZX2 261 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 P2RY12Q9H244 342 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 CXXC4Q9H2H0 198 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 ANKHQ9HCJ1 492 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 CCM2LQ9NUG4 571 aaPredicted RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 R3HDM2Q9Y2K5 976 aaKnown RBP8.45□□□□□ -1.06
VPS11-203ENST00000529545 TCAF1Q9Y4C2 921 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 PCDHA13Q9Y5I0 950 aa8.45□□□□□ -1.06
VPS11-203ENST00000529545 FAM237BA0A1B0GVD1 139 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 OR2W5A6NFC9 320 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 TMEM200CA6NKL6 621 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 ARHGEF33A8MVX0 844 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 AKR1B15C9JRZ8 316 aaPredicted RBP8.44□□□□□ -1.06
VPS11-203ENST00000529545 H7BY64 318 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 SGK494L7N484 410 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 MYO1CO00159 1063 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 FCHO1O14526 889 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 HAT1O14929 419 aa8.44□□□□□ -1.06
VPS11-203ENST00000529545 KIF5CO60282 957 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms