RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OR5R1Q8NH85 324 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 LMO3Q8TAP4 145 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 LRRC15Q8TF66 581 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 ABTB1Q969K4 478 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-212ENST00000529046 DNAJC19Q96DA6 116 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 SPATA17Q96L03 361 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF560Q96MR9 790 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 DACH2Q96NX9 599 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 LRRC3BQ96PB8 259 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 OR1F2PQ96R84 312 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 PKMYT1Q99640 499 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 RAB6CQ9H0N0 254 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 TMEM206Q9H813 350 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 KLHL1Q9NR64 748 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 DPP3Q9NY33 737 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 WSB2Q9NYS7 404 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-212ENST00000529046 COPG2Q9UBF2 871 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 VPS28Q9UK41 221 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 RAB23Q9ULC3 237 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 NDRG2Q9UN36 371 aaKnown RBP4.55□□□□□ -1.68
CSDE1-212ENST00000529046 EXO1Q9UQ84 846 aaKnown RBP4.55□□□□□ -1.68
CSDE1-212ENST00000529046 PCDHGA5Q9Y5G8 931 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 SNX9Q9Y5X1 595 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 CITO14578 2027 aa4.55□□□□□ -1.68
CSDE1-212ENST00000529046 TRIP11Q15643 1979 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 IFITM10A6NMD0 228 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ANKRD63C9JTQ0 380 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PAPSS1O43252 624 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF500O60304 480 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 TBCAO75347 108 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NOL4O94818 638 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PGM3O95394 542 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ZBTB11O95625 1053 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 HIST1H2ABP04908 130 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 OR4Q2P0C623 313 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF806P0C7X5 589 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GJA1P17302 382 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 HIST1H2ADP20671 130 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PTMSP20962 102 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PON1P27169 355 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NMT1P30419 496 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 EIF2DP41214 584 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PIK3CAP42336 1068 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 LHX1P48742 406 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ACOT2P49753 483 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GPR143P51810 404 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 TAS2R38P59533 333 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 RPL10AP62906 217 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 MC1RQ01726 317 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 FOXM1Q08050 763 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 LRMPQ12912 555 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 EPS8Q12929 822 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 RUNX3Q13761 415 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 SLC39A12Q504Y0 691 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 KCNT1Q5JUK3 1230 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NSUN5P2Q63ZY6 315 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 WSCD1Q658N2 575 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 C18orf63Q68DL7 685 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GFRALQ6UXV0 394 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 HIST3H2AQ7L7L0 130 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NR2C2APQ86WQ0 139 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 OR1J2Q8NGS2 313 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ORAI1Q96D31 301 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 C3orf30Q96M34 536 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PGLYRP2Q96PD5 576 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GCNAQ96QF7 691 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ACCSQ96QU6 501 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PIGMQ9H3S5 423 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 CUEDC2Q9H467 287 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PLK3Q9H4B4 646 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 ZSCAN16Q9H4T2 348 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 UPF2Q9HAU5 1272 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 EPB41L5Q9HCM4 733 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GKN1Q9NS71 199 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 GTSE1Q9NYZ3 720 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 NENFQ9UMX5 172 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 SMC3Q9UQE7 1217 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 DNAH14Q0VDD8 3507 aa4.54□□□□□ -1.68
CSDE1-212ENST00000529046 PDCD11Q14690 1871 aaKnown RBP4.54□□□□□ -1.68
CSDE1-212ENST00000529046 F5P12259 2224 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 AP3D1O14617 1153 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 EIF3DO15371 548 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 SLC16A5O15375 505 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 OGG1O15527 345 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 EXTL3O43909 919 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HS6ST1O60243 411 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HNRNPCL1O60812 293 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HUS1O60921 280 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 GFPT2O94808 682 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 PRAMEF12O95522 483 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 HLA-DOBP13765 273 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 ANXA7P20073 488 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 GALCP54803 685 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 CLDN20P56880 219 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 NOP14P78316 857 aaKnown RBP4.53□□□□□ -1.68
CSDE1-212ENST00000529046 RBP5P82980 135 aa4.53□□□□□ -1.68
CSDE1-212ENST00000529046 MYL7Q01449 175 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms