RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PKP4Q99569 1192 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 ZNF559Q9BR84 538 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 TRIM51Q9BSJ1 452 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 PCBD2Q9H0N5 130 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 TSPY26PQ9H489 355 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 CDCP1Q9H5V8 836 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 CCDC177Q9NQR7 707 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-211ENST00000528484 TMEM184CQ9NVA4 438 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 CRYL1Q9Y2S2 319 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 KLF13Q9Y2Y9 288 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-211ENST00000528484 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
CMTM1-211ENST00000528484 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ZNF469Q96JG9 3925 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 PABPN1LA6NDY0 278 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 E7ENX8 843 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 KLRC4-KLRK1H3BQV0 150 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 SGK494L7N484 410 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 NME2P1O60361 137 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 NEURL1O76050 574 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ZWINTO95229 277 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 VAPBO95292 243 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 NME2P22392 152 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 CRADDP78560 199 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 BASP1P80723 227 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 HSF1Q00613 529 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 MEF2AQ02078 507 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 TAP2Q03519 686 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 GBX1Q14549 363 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 USP10Q14694 798 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 HERC3Q15034 1050 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ACSBG2Q5FVE4 666 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 NIPAL1Q6NVV3 410 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 CEP128Q6ZU80 1094 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 PCGF5Q86SE9 256 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 CD163Q86VB7 1156 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 RPS19BP1Q86WX3 136 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 SIAH3Q8IW03 269 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 REXO1L1PQ8IX06 675 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ARHGEF39Q8N4T4 335 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 TBC1D19Q8N5T2 526 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 CPSF7Q8N684 471 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 FBXO15Q8NCQ5 510 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ZCCHC10Q8TBK6 192 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 ZNF480Q8WV37 535 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 LPGAT1Q92604 370 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 RND1Q92730 232 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 BIRC8Q96P09 236 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 DMRTA2Q96SC8 542 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 TSGA10Q9BZW7 698 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 EIF2B3Q9NR50 452 aaKnown RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 TREX1Q9NSU2 369 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
CMTM1-211ENST00000528484 PACSIN2Q9UNF0 486 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-211ENST00000528484 INTS1Q8N201 2190 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 KCNE1BA0A087WTH5 132 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 CTAGE9A4FU28 777 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 FAM90A27PA6NNH2 459 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 CDC40O60508 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 RDH16O75452 317 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 CDC123O75794 336 aaPredicted RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 WISP2O76076 250 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 FTCDO95954 541 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 STATHP02808 62 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 ENO3P13929 434 aaPredicted RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 CD99P14209 185 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 OGNP20774 298 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 NMBRP28336 390 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 SLC26A5P58743 744 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 PPP2R2AP63151 447 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 SARNPP82979 210 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 MPP1Q00013 466 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 MYBPHQ13203 477 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 OASLQ15646 514 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 TYSND1Q2T9J0 566 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 TMEM214Q6NUQ4 689 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 PAOXQ6QHF9 649 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 NCCRP1Q6ZVX7 275 aaPredicted RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 GSTA5Q7RTV2 222 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 ASPGQ86U10 573 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 C17orf64Q86WR6 236 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 PALM2Q8IXS6 379 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 CLYBLQ8N0X4 340 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 POM121Q96HA1 1249 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 PEX11GQ96HA9 241 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 TREX2Q9BQ50 279 aaPredicted RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 RBCK1Q9BYM8 510 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 TP63Q9H3D4 680 aaPredicted RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 INTS10Q9NVR2 710 aaKnown RBP10.86□□□□□ -0.67
CMTM1-211ENST00000528484 KCNN3Q9UGI6 736 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
CMTM1-211ENST00000528484 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
CMTM1-211ENST00000528484 GOLGA8KD6RF30 607 aa10.85□□□□□ -0.67
CMTM1-211ENST00000528484 GOLGA8TH3BQL2 631 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms